PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN05347.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family MYB
Protein Properties Length: 340aa    MW: 38905 Da    PI: 5.1252
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN05347.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding50.25.7e-161461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+W+ eEde+l++++k  G g+W++ ++  g+ R++k+c++rw +yl
       PIN05347.1 14 KGKWSVEEDEKLINYIKANGEGSWRSLPKNAGLLRCGKSCRLRWINYL 61
                     79******************************99************97 PP
2Myb_DNA-binding60.14.6e-1967112148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg++T+eEde +v+++k lG++ W+ Ia++++ gRt++++k++w+++l
       PIN05347.1  67 RGNFTAEEDETIVKLHKNLGNR-WSIIASHLP-GRTDNEIKNYWNSHL 112
                      89********************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 340 aa     Download sequence    
MGKTPCCEKT ELKKGKWSVE EDEKLINYIK ANGEGSWRSL PKNAGLLRCG KSCRLRWINY  60
LREDVKRGNF TAEEDETIVK LHKNLGNRWS IIASHLPGRT DNEIKNYWNS HLSRSIYRFR  120
FIGESTLSAA DMIKMVNTHK ERAGRMSRAN TEKYNKNSIN SHSTASRTRN SERSSANLPN  180
KAEEENSDNI HGPNIESNTK ENENDPNPLD PCERKNERKS ASFDGSFSNR DLLCSEDWPD  240
SFMQLGPLEK VDEDILMPSK HFLEGENILL NDERESVLMN TDSDERDCGA WSSNSETGDL  300
YACSSPIVSY FTGEVIHWDH NGACEDVNNL WSEEDIMIWP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G49330.12e-65MYB family protein