PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN05294.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

AP2

Protein Properties

Length: 333aa MW: 37744.5 Da PI: 6.5164

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN05294.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	40.5	6.7e-13	45	108	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse....ng....krkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d ++ n+ ++ + lg ++ +e Aa a++ a++k++g PIN05294.1 45 SVYRGVTRHRWTGRYEAHLWDkNCWnesqNKkgrqVKIEIELGAYDDEEAAAHAYDLAALKYWG 108 78*****************9999666433765444999********************98 PP
2	AP2	41	4.8e-13	140	185	7	55
AP2 7 rwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 r+++ +grW+A+I + g +k+ +lg++ t eeAa a++ a+ +++g PIN05294.1 140 RRHHHNGRWEARIGRvF---G-NKYLYLGTYATQEEAATAYDMAAIEYRG 185 89999*****99966...3.6***********************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 333 aa Download sequence
MGKSSRQKKS AVTSDGNIDK NTDGVAKSKR TRKSIPRQSP QQRSSVYRGV TRHRWTGRYE 60 AHLWDKNCWN ESQNKKGRQV KIEIELGAYD DEEAAAHAYD LAALKYWGQD TILNFPLSTY 120 EKELVEMEGQ TKEEYIGSLR RHHHNGRWEA RIGRVFGNKY LYLGTYATQE EAATAYDMAA 180 IEYRGVNAVT NFDLSRYIKW LQPPQDNPNN PQPISNNNVD TMQNPSQQLG FGFPNHHQES 240 PKHQSGNKPG STTALGLLLQ SSKFKEMLQQ ATTCNYNSSS PSEPDPPRSS FPDDIQTSFE 300 IQDSSSFAEE HGIVFGSDYD SFASEILQCE LDT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G16060.1	4e-68	AP2 family protein