PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN04835.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family MYB
Protein Properties Length: 294aa    MW: 33837.9 Da    PI: 8.6299
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN04835.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding47.34.8e-154893147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     rg W + Ed +l ++v+ +G+ +W+ Ia+ +  gR++k+c++rw++ 
       PIN04835.1 48 RGHWKPPEDAKLRELVAIYGPQNWNFIAENLE-GRSGKSCRLRWYNQ 93
                     899*****************************.************96 PP
2Myb_DNA-binding50.45.2e-16101144247
                      SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                       ++T+eE+e+l +a++ +G++ W+ I+r ++ gRt++ +k+ w+ +
       PIN04835.1 101 RAFTEEEEEKLMEAHRVYGNK-WAFISRLFP-GRTDNAVKNQWHVL 144
                      689******************.*********.***********987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 294 aa     Download sequence    
MGRFSGRLNN NGQEEEVADN GAMGECSKLI LKKNGENPNG SCRKVCSRGH WKPPEDAKLR  60
ELVAIYGPQN WNFIAENLEG RSGKSCRLRW YNQLDPKINK RAFTEEEEEK LMEAHRVYGN  120
KWAFISRLFP GRTDNAVKNQ WHVLMARKYR EKSKSYVKRK YSSDRTVLER RLMEECSNDY  180
IAANDLQLQN GFGQEVFRWN YDNYFSGISL HCLHASCERK SWNMTTEIEE SGNHYVHLSR  240
LHYNSPAGST TQISFAAPIS PSESVADRYE DSSHFLQKSA KPMFIDFLGV GAAN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69560.11e-60MYB family protein