PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN04765.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family MYB_related
Protein Properties Length: 309aa    MW: 34274.8 Da    PI: 9.4775
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN04765.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding38.62.4e-1256100147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      r +WT+ E++++++a +++  + Wk+I + +g  +t  q++s+ qky
       PIN04765.1  56 RESWTEPEHDKFLEALQLFDRD-WKKIEAFVG-SKTVIQIRSHAQKY 100
                      789*****************77.*********.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    
MVSLNANQPE GFYLDPTGMA LPNLGSFSSP TAGNSASPVE DPNKKVRKPY TITKSRESWT  60
EPEHDKFLEA LQLFDRDWKK IEAFVGSKTV IQIRSHAQKY FLKVQKSGTS EHLPPPRPKR  120
KAAHPYPQKA SKIAPVVSQE ISSFQSSPVV PDPGFVRRPD SSALLRHPDT AAAIPRWTDK  180
PVHCTNLSHV TRGDARSAGQ SLPNIYSCSS NASTPRTRPT VLPDFAQVYS FIGSVFDPNV  240
TGHLQKLKKM DPIDIETVLL LMRNLSINLA SPDFEDHRRL LSSYEIDQEK HKAIDVTDPI  300
LGGQSLDTT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52660.12e-99MYB_related family protein