PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN04355.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family GRAS
Protein Properties Length: 420aa    MW: 47610.1 Da    PI: 6.9466
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN04355.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS402.64e-123384191373
        GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetsekn....sseelaal.............. 81 
                 +++lL++cAe v+ +dl++a++l++ ls ++sp+gd+++Rl+++ft+AL+ rl+++   + +  +ps t++++    s      +              
  PIN04355.1  38 MRQLLITCAELVARSDLSAARRLISILSSNSSPYGDSTERLVHHFTKALSLRLNSTFFIIPNPAAPSLTASTSinimS------Hhrndfgsnddaliq 130
                 589****************************************************66666666666666544332320......135666777777666 PP

        GRAS  82 ...klfsevsPilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfe 177
                      +++v+P+++fs+ltaNqaIlea+++++++Hi+Df+i++G+QWp+L+qa a+R  ++p+lRiT+ g+    +   l++tg+rLakfA++lg++f+
  PIN04355.1 131 ssyLSLNQVTPFIRFSQLTANQAILEAIQNQQAIHILDFEIMHGVQWPPLMQAVAER-YPSPTLRITATGH----DLGILRRTGDRLAKFAHSLGLRFQ 224
                 54334***************************************************9.899**********....9*********************** PP

        GRAS 178 fnvlvak.rledl.eleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleak 274
                 f++++   + + +  ++++ + p+E laVn+v+ lhrll+++  l      +L+ +k + P+v++v+e+ea+hn++ F +rf+eal++y+a+fdslea+
  PIN04355.1 225 FHPIILLpNEDPIsITSSIVLLPDEILAVNCVHYLHRLLKDRDRLCL----FLRHIKAMGPRVLTVAEREANHNHPIFQQRFVEALDHYAAVFDSLEAT 319
                 ***9555344444146899999*****************66666666....************************************************ PP

        GRAS 275 lpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSa 372
                 lp++s+er  vE+ ++grei ++va+eg++rrerhe++++W+e+l+++GF++vpls +a +qaklllr ++ s+gy+++  ++s+ lgW+++pL+svS+
  PIN04355.1 320 LPPTSRERLAVEQIWFGREIADIVAAEGENRRERHERFRSWEEMLRNSGFSNVPLSPFALSQAKLLLRLHYpSEGYQLHIVNDSFSLGWQNQPLFSVSS 418
                 *************************************************************************************************** PP

        GRAS 373 W 373
                 W
  PIN04355.1 419 W 419
                 * PP
Sequence ? help Back to Top
Protein Sequence    Length: 420 aa     Download sequence    
MLGSFAGGSS SHDEDQDEHE PSPPNVYTIH HQIQPRSMRQ LLITCAELVA RSDLSAARRL  60
ISILSSNSSP YGDSTERLVH HFTKALSLRL NSTFFIIPNP AAPSLTASTS INIMSHHRND  120
FGSNDDALIQ SSYLSLNQVT PFIRFSQLTA NQAILEAIQN QQAIHILDFE IMHGVQWPPL  180
MQAVAERYPS PTLRITATGH DLGILRRTGD RLAKFAHSLG LRFQFHPIIL LPNEDPISIT  240
SSIVLLPDEI LAVNCVHYLH RLLKDRDRLC LFLRHIKAMG PRVLTVAERE ANHNHPIFQQ  300
RFVEALDHYA AVFDSLEATL PPTSRERLAV EQIWFGREIA DIVAAEGENR RERHERFRSW  360
EEMLRNSGFS NVPLSPFALS QAKLLLRLHY PSEGYQLHIV NDSFSLGWQN QPLFSVSSWH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G55580.11e-131GRAS family protein