PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN04295.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

C2H2

Protein Properties

Length: 285aa MW: 31019.2 Da PI: 7.0476

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN04295.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.5	0.00096	109	131	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C+++F++ L H +H PIN04295.1 109 YECKTCSRTFPSFQALGGHRASH 131 99**********99999998887 PP
2	zf-C2H2	12	0.00062	188	210	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg F + L H+r+H PIN04295.1 188 HECSICGAEFASGQALGGHMRRH 210 78********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 285 aa Download sequence
MNMEISEDFS ASNDQVIVKG KRTKRLRPSS STSSSGGGEI NYNSSVSSPA TSTSTEEDED 60 MANCLILLAR GGFSSQTEEE IKPSESKFSS RKFTEMATTT NGKAGIYVYE CKTCSRTFPS 120 FQALGGHRAS HKKPKPAADV DQKISHPAVG APPPEDQQQQ QEDVKFSKIN AMISTTPPSS 180 NKIYPKIHEC SICGAEFASG QALGGHMRRH RSANNSVTTN TIKSTNDSSS SQDNGEKTRN 240 VLSLDLNLPA PPEDDHRETK FHQFSSNQQP HLVFSNAAPL VDCHY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28200.1	3e-54	C2H2 family protein