PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN04240.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | GATA | ||||||||
Protein Properties | Length: 135aa MW: 14690 Da PI: 10.6969 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 65.2 | 7e-21 | 20 | 53 | 1 | 34 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 Cs C+ttkTplWR+gp+g+k+LCnaCG++yrkk+ PIN04240.1 20 CSDCKTTKTPLWRSGPSGPKSLCNACGIRYRKKR 53 ********************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 135 aa Download sequence |
MESGQKEESL SSEVEITKSC SDCKTTKTPL WRSGPSGPKS LCNACGIRYR KKRPTTAAAS 60 TPDGKNDGKK GKIGKTRSLK IRDALKVNLR PLGKEVEVME GQRSPAKRLR SPRQWGEVER 120 AALLLMALSC GAVFA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G06740.1 | 2e-20 | GATA family protein |