PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN04210.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family bHLH
Protein Properties Length: 329aa    MW: 36862.2 Da    PI: 6.4362
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN04210.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.56.3e-10171218455
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +h+ +Er RR++i +++  L++l+P +    +k   Kae+L + ++Y++sLq
  PIN04210.1 171 SHSLAERARREKISKKMKCLQDLVPGC----NKMTGKAEMLDEIINYVQSLQ 218
                 8*************************9....778*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 329 aa     Download sequence    
MLPSSHSSSS SSSSSLSSSA YNMDRLSVLD RQKALLQRHY HQQQSHSDHL NESHFWQNDA  60
SLIHRALSGP EITISNCNNI ARVPVPKPDW QCNSSLPNRE GNGSCSVKKR KAEFDVEDET  120
KDGRVEVEEE KSEITTKAER ETSANTSSKV SEVQKPDYIH VRARRGQATD SHSLAERARR  180
EKISKKMKCL QDLVPGCNKM TGKAEMLDEI INYVQSLQKQ VEFLSMKLAA INPRLEFSID  240
NFLAKEISTY IESLQAAAAT QFEANNSIFC QYNCGADTPM DQSPMLPQKA PTSSMPIPEM  300
FLDSSSIPQL QQLSGWESDW PSLPHTGFH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36540.11e-54bHLH family protein