PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN04043.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family C2H2
Protein Properties Length: 186aa    MW: 21336.9 Da    PI: 5.3234
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN04043.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.69.3e-053254123
                EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                y+C+ C++ F++   L  H++ H
  PIN04043.1 32 YECGFCKRGFNTAQALGGHMNIH 54
                99*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 186 aa     Download sequence    
MESNNQEESI DSCEEADQVD LPKDYLGVGR SYECGFCKRG FNTAQALGGH MNIHRRDRAR  60
NKDTKKNSNE QEENRFGPGK SVDHHFGHHD HQSSSSYAAD FPASTSGSRE SRPLYGSHFR  120
GDLQFCSSDF DRDERQHQNQ LVPDDGSMNF RSDYHRMVLD DLEKKRQGDV SQKEELDLEL  180
RLGYDS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37740.13e-13C2H2 family protein