PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN03959.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | bHLH | ||||||||
Protein Properties | Length: 237aa MW: 26527 Da PI: 8.4758 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 40.9 | 3.7e-13 | 64 | 109 | 3 | 53 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIks 53 r+h+e+E+rRRdriN +++Lr+l+Pk+ +K++Ka+ L ++v+++++ PIN03959.1 64 RSHSEAEKRRRDRINAQLATLRKLIPKS-----EKMDKAALLGHVVNHVRE 109 78*************************8.....8************99875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 237 aa Download sequence |
MENCFCPQEY SSDNTLMVPW LPPGDAAAPP LQYHWYPQAA VVPQPWASPP FEGAAEDRTA 60 SGSRSHSEAE KRRRDRINAQ LATLRKLIPK SEKMDKAALL GHVVNHVREQ SKRAKEVSKI 120 STIPTEIDQI TIDYINAEET TSQDNQNIYM KASICCEDRE QVFAELNRAL KELGVTIVQA 180 EITSVGGRMN TNFILCAKDS SNNSLKQSLK LALNRVLLSS AQSSFSARSK RQRFFLS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G40200.1 | 3e-37 | bHLH family protein |