PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN03924.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

FAR1

Protein Properties

Length: 880aa MW: 99287.9 Da PI: 6.7101

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN03924.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	50.9	5.1e-16	66	138	2	89
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 fY +YA+++GFs+r++ + +sk +g+ t+r+f Cs+ g +++ ++ C+a+l+++++ +++w vtk+e+eH+H++ PIN03924.1 66 FYADYARHLGFSTRVNFN-RSKADGTATSREFLCSRDGLKKQGGES--------------CDAMLRIELRGENRWIVTKFEKEHSHTI 138 9***********9975.5569999**********998877..............************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 880 aa Download sequence
MDVELIGVEE GNMGQRGGVT DDGDDDSNDG GEMDAFRHSL VQDENGIFTE PHVGMEFDSE 60 DAAKMFYADY ARHLGFSTRV NFNRSKADGT ATSREFLCSR DGLKKQGGES CDAMLRIELR 120 GENRWIVTKF EKEHSHTIGS RRKVHYIRSK RHFAATTNNE TFEGIDVVPG GMMYVSVDGN 180 SVPSETNHMG KNLPASGLNH TVKNISSLGY TSGYSSRRRT LGRDAQNLLD YFKKMQAENP 240 GFYYAIQLDE ENRMANAFWA DARSRTAYSH FGDAVILDTS YRTNQCRVPF APFTGVNHHG 300 QIILFGCALL LDESEATFVW LFKTFLAAMN DRAPVSLTTD QDRAIQAAIM QVFPGARYCV 360 NKWHVLREGQ ERMAHVCLAH PNFQVELYNC INTTETIGEF ESFWASILNK YDLKRNDWLQ 420 SIYDARRQWV PVYFRDSFFA AISPSPGFES SFFDGYVNQQ TTLPMFFRQY ERALENSFER 480 EVEADFDTMR ITPVLRTPSP MEKQAASLYT KRIFSKFQEE LVETFVYTAN KVDEEGHNST 540 YRVAKFEDDH KAYFVSLNIA EMKANCSCRM FEYCGILCRH VLTVFTVTNV LTLPSHYILK 600 RWTRNAKSMA VGDEPNGLQG HESLTTRYNN LCKEAIKFAE EGAIASETYS AALVSLREGG 660 KKVAAVKKSV AKVAPSSSQV SGIGFDDRRP SIVNPEMPPL LWPRQDEIIR RFNLNDAGVP 720 SQAISSSSVP RIAPVSLNRD GGHTDNMVVL PCLKSMTWVM ENKDLTPANR VAVINLKLQD 780 YSRTPTGESE VKFSLSRVTL EPMLRSMAYI SEQLSSPANK VAVINLKLQD TETTSGESEV 840 KFQVSRDTLG AMLRSMAYIR EQLSNAVEPK QDNSAKRPRK

Sequence ? help Back to Top

Protein Sequence Length: 880 aa Download sequence

MDVELIGVEE GNMGQRGGVT DDGDDDSNDG GEMDAFRHSL VQDENGIFTE PHVGMEFDSE  60
DAAKMFYADY ARHLGFSTRV NFNRSKADGT ATSREFLCSR DGLKKQGGES CDAMLRIELR  120
GENRWIVTKF EKEHSHTIGS RRKVHYIRSK RHFAATTNNE TFEGIDVVPG GMMYVSVDGN  180
SVPSETNHMG KNLPASGLNH TVKNISSLGY TSGYSSRRRT LGRDAQNLLD YFKKMQAENP  240
GFYYAIQLDE ENRMANAFWA DARSRTAYSH FGDAVILDTS YRTNQCRVPF APFTGVNHHG  300
QIILFGCALL LDESEATFVW LFKTFLAAMN DRAPVSLTTD QDRAIQAAIM QVFPGARYCV  360
NKWHVLREGQ ERMAHVCLAH PNFQVELYNC INTTETIGEF ESFWASILNK YDLKRNDWLQ  420
SIYDARRQWV PVYFRDSFFA AISPSPGFES SFFDGYVNQQ TTLPMFFRQY ERALENSFER  480
EVEADFDTMR ITPVLRTPSP MEKQAASLYT KRIFSKFQEE LVETFVYTAN KVDEEGHNST  540
YRVAKFEDDH KAYFVSLNIA EMKANCSCRM FEYCGILCRH VLTVFTVTNV LTLPSHYILK  600
RWTRNAKSMA VGDEPNGLQG HESLTTRYNN LCKEAIKFAE EGAIASETYS AALVSLREGG  660
KKVAAVKKSV AKVAPSSSQV SGIGFDDRRP SIVNPEMPPL LWPRQDEIIR RFNLNDAGVP  720
SQAISSSSVP RIAPVSLNRD GGHTDNMVVL PCLKSMTWVM ENKDLTPANR VAVINLKLQD  780
YSRTPTGESE VKFSLSRVTL EPMLRSMAYI SEQLSSPANK VAVINLKLQD TETTSGESEV  840
KFQVSRDTLG AMLRSMAYIR EQLSNAVEPK QDNSAKRPRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27110.2	0.0	FAR1 family protein