PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN03907.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

NAC

Protein Properties

Length: 269aa MW: 30761.1 Da PI: 6.1765

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN03907.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	137.5	8.7e-43	9	138	2	127
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 p+GfrF Pt+eelv+++L++k++g++ ++++vi+ +diy+++P++Lp+ + a+ ++w+fF++r++++a+g r+nr t++gyWkatg+ +v+s++ PIN03907.1 9 PVGFRFYPTEEELVSFFLQNKLNGTRPDIDRVIPVLDIYDSNPSELPHlageYCPADGEQWFFFIPRQEREARGGRPNRLTTEGYWKATGSPGDVYSSQ 107 89*************************999***********645654555889************************************ PP NAM 97 gelvglkktLvfykgrapkgektdWvmheyr 127 ++++g k+t+vfy grap+g+kt W m+ey+ PIN03907.1 108 NRVIGRKRTMVFYVGRAPSGRKTMWKMNEYK 138 ****************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 269 aa Download sequence
MEDDHEYFPV GFRFYPTEEE LVSFFLQNKL NGTRPDIDRV IPVLDIYDSN PSELPHLAGE 60 YCPADGEQWF FFIPRQEREA RGGRPNRLTT EGYWKATGSP GDVYSSQNRV IGRKRTMVFY 120 VGRAPSGRKT MWKMNEYKAI ASHDHAPSSS SSTFATPQLR EEFSLCRIYK RPKCLRAFDR 180 RPPSEAVLGV QAAVAAPHHY SHHEAAAFAN QLHNPVAPDV TDNCSDRSSS SGDYMQTNNY 240 QSQFVDSGNN PDLAIDHEPL WDWDRFNLF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G22380.1	2e-77	NAC family protein