PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN03793.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

C2H2

Protein Properties

Length: 356aa MW: 39943.1 Da PI: 9.7855

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN03793.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.2	3e-05	55	75	3	23
ETTTTEEESSHHHHHHHHHHT CS zf-C2H2 3 CpdCgksFsrksnLkrHirtH 23 C++Cgk F r nL+ H r H PIN03793.1 55 CEICGKGFQRDQNLQLHRRGH 75 *******************88 PP
2	zf-C2H2	13.3	0.00024	129	151	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k++ +s+ k H +t+ PIN03793.1 129 WKCDKCSKRYAVQSDWKAHSKTC 151 58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 356 aa Download sequence
MTEEVVSIAS TQNPINGSNN PPVKKKRNLP GTPDPEAEVI ALSPKTLMAT NRFLCEICGK 60 GFQRDQNLQL HRRGHNLPWK LKQRTSKEVR KRVYVCPEKT CVHHHPSRAL GDLTGIKKHF 120 CRKHGEKKWK CDKCSKRYAV QSDWKAHSKT CGTREYKCDC GTIFSRRDSF ITHRAFCDAL 180 AEETARVTAA SHMNNHAPNI NYHFIGSSLG QQYSPSIFKP FSTVNQNIDP IRRSLSLWIP 240 NQEMHPMGTF YHDNPIISPP QQPTYNTHQL NWDFGNKLSP NAADHHNLTN NPIIPLSKEV 300 SVPSLFSSQA QNNQPASANI SATALLMKAA QIGSSATTNH DPSFLENFGG IKGNDQ

Sequence ? help Back to Top

Protein Sequence Length: 356 aa Download sequence

MTEEVVSIAS TQNPINGSNN PPVKKKRNLP GTPDPEAEVI ALSPKTLMAT NRFLCEICGK  60
GFQRDQNLQL HRRGHNLPWK LKQRTSKEVR KRVYVCPEKT CVHHHPSRAL GDLTGIKKHF  120
CRKHGEKKWK CDKCSKRYAV QSDWKAHSKT CGTREYKCDC GTIFSRRDSF ITHRAFCDAL  180
AEETARVTAA SHMNNHAPNI NYHFIGSSLG QQYSPSIFKP FSTVNQNIDP IRRSLSLWIP  240
NQEMHPMGTF YHDNPIISPP QQPTYNTHQL NWDFGNKLSP NAADHHNLTN NPIIPLSKEV  300
SVPSLFSSQA QNNQPASANI SATALLMKAA QIGSSATTNH DPSFLENFGG IKGNDQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G44160.1	1e-138	C2H2 family protein