PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN03788.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

HB-other

Protein Properties

Length: 1749aa MW: 197049 Da PI: 5.6769

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN03788.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	57.2	2.9e-18	47	101	3	57
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 kR t++qle+Le+ ++++ yps++ r+eL++kl+L++rq ++WF+ rR k++k PIN03788.1 47 KRKMKTPSQLEILEKTYAMETYPSEALRAELSAKLDLSDRQLQMWFCHRRLKDRK 101 89999************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1749 aa Download sequence
MEVDEGVGEN SGGGAGAAAG GGGAGGGGGG SVEVEKKNTP EGEPKVKRKM KTPSQLEILE 60 KTYAMETYPS EALRAELSAK LDLSDRQLQM WFCHRRLKDR KAPTEKRQKK SASSSAVAGS 120 SGGGAHEAVV NNADVAKDRG SSLSLFGNME SQPRVAHKVG TAVPRISTEL PSMRRFYEPP 180 LAISEQRAIR FVEAQLGEPL REDGPILGME FDPLPPGAFG APIVTSEQQK PAGRSFDTQL 240 YERLDAKPVK VREPLAYQSA SRALQEYQFL PEKPSVRNDA YERAVTPQYY GSPTDILNAR 300 VPLPSGRSVK HSNEQVSSGY LQGQVPNLSL LPQQGRPDLH LSPAPAEVAV ARPVASMVNV 360 NIDSHHLIHP VTGLDHHTTP ERRIVLDQER LERKRKSEEA RIAKEVEAHE KRIRKELEKQ 420 DSLRRKREEQ MRKEMERQDR ERRKEEERLL REKQREEERY QREQRREMER REKFLQKEYI 480 RAEKMRLKEE MRREKEAARL KAANDRAAAR RIAKESMELI DDERLELMEL ATLSRGLPSI 540 LALDNEALQD LDLFKDKLPE FPPECVHLKR PFGLQPWTDS EENVGNLLMV WRFLIAFADV 600 LGLWPFTLDE FTQALHDYEP RLLGEIHMAL LRIIIKDIED VARTPAAAVA ANQNSAGITA 660 GGHPHIVEGA YAWGFDLLSW QRHLSPLTWP EVLRQFALSA GFGPKLKKRD LKPAYLHDEN 720 EGDDGADTIS NLRSGIAAEN AVAIMQERGF SNPRRSRHRL TPGTVKFAAF HILSLEGSKG 780 LSIMEVANKI QRSGLRDLTT SKTPEASISA ALSRDTKLFE RTAPSTYCVR SPYRKDPADA 840 EAILSEAREK IRVYQNGRIE EEAEDIEKEV ERDQDSESDV ADDPDVDDLD AVPKLKEASH 900 SGKTSRFELI ETPLDAQENL KSSSTLTQPV DEIHDPEDTV IDECGSGDPW VQGLTEAEYA 960 DLSVEERLNA LVALISVANE GNAIRVALEE RLEAANALKK QMWAEAQLDK RRIKEEHVFK 1020 LQHSSLPVNR SEQNFPSFTV EHRRSPLPSV DMKNESSSAK PAFQLVDLND QQNEENYCNN 1080 LNDQQLVPDN FLLQQSVFAA EKSRSYRKAL IGHRAEEMYV YRSLPLGQDR RRNRYWQFIS 1140 SPSRNDPGCG RIFVESCNGI WRLIDSEEGF DALLSCLDVR GIRESHLHSM LQSIGASFKE 1200 TARRNLLGSN SGFHNHDEVK KNVPEIRPKL DFSSGTDSPK SIVCASPSNS PGPSVSFSID 1260 LKNNCTEENE ITVRYKDYED WIWKECFDSN VLGAMKYGKL SRQRLLDICN HCHIVFSWED 1320 NHCPSCHGIY STSDKTFSFA EHVMQCKMKW SEEREGFLLN VSLPPRIRLL KAQLATIEAS 1380 VPSDAFECVW SDEYRKSWGM KLHMASTAEQ LLQSLTLLEG SIKTEFLSAN YETTSKILSS 1440 CKVTGRYADT FCAPEAVLVL PWIPQTTPAV ALRIMEIDTS IYYTSDQKAA HQKDNEAGSF 1500 IKFPSIYSAF GSSIDNVTQT GYLQQDNHWV DVGIGRTVLK RGRGRPRGPS RTSGVKSQKR 1560 SQNELHNLST RKDKFTRVPG WKGRTRPRGS TKKGRRSTRS RQKSATRTVA NVTEKRIVKD 1620 IVKDIVFDLA ETPAENEATE NVSSSERSEF DNDNDNGQAS ADEYDDPFVD ERVEYREVDE 1680 CIEDGHEGNY DDDYNDDEDE GDDYYTEGYV NSDFQEEGIQ TRGQRQIGNV DGSPDRGLGS 1740 SSSSSEYSY

Sequence ? help Back to Top

Protein Sequence Length: 1749 aa Download sequence

MEVDEGVGEN SGGGAGAAAG GGGAGGGGGG SVEVEKKNTP EGEPKVKRKM KTPSQLEILE  60
KTYAMETYPS EALRAELSAK LDLSDRQLQM WFCHRRLKDR KAPTEKRQKK SASSSAVAGS  120
SGGGAHEAVV NNADVAKDRG SSLSLFGNME SQPRVAHKVG TAVPRISTEL PSMRRFYEPP  180
LAISEQRAIR FVEAQLGEPL REDGPILGME FDPLPPGAFG APIVTSEQQK PAGRSFDTQL  240
YERLDAKPVK VREPLAYQSA SRALQEYQFL PEKPSVRNDA YERAVTPQYY GSPTDILNAR  300
VPLPSGRSVK HSNEQVSSGY LQGQVPNLSL LPQQGRPDLH LSPAPAEVAV ARPVASMVNV  360
NIDSHHLIHP VTGLDHHTTP ERRIVLDQER LERKRKSEEA RIAKEVEAHE KRIRKELEKQ  420
DSLRRKREEQ MRKEMERQDR ERRKEEERLL REKQREEERY QREQRREMER REKFLQKEYI  480
RAEKMRLKEE MRREKEAARL KAANDRAAAR RIAKESMELI DDERLELMEL ATLSRGLPSI  540
LALDNEALQD LDLFKDKLPE FPPECVHLKR PFGLQPWTDS EENVGNLLMV WRFLIAFADV  600
LGLWPFTLDE FTQALHDYEP RLLGEIHMAL LRIIIKDIED VARTPAAAVA ANQNSAGITA  660
GGHPHIVEGA YAWGFDLLSW QRHLSPLTWP EVLRQFALSA GFGPKLKKRD LKPAYLHDEN  720
EGDDGADTIS NLRSGIAAEN AVAIMQERGF SNPRRSRHRL TPGTVKFAAF HILSLEGSKG  780
LSIMEVANKI QRSGLRDLTT SKTPEASISA ALSRDTKLFE RTAPSTYCVR SPYRKDPADA  840
EAILSEAREK IRVYQNGRIE EEAEDIEKEV ERDQDSESDV ADDPDVDDLD AVPKLKEASH  900
SGKTSRFELI ETPLDAQENL KSSSTLTQPV DEIHDPEDTV IDECGSGDPW VQGLTEAEYA  960
DLSVEERLNA LVALISVANE GNAIRVALEE RLEAANALKK QMWAEAQLDK RRIKEEHVFK  1020
LQHSSLPVNR SEQNFPSFTV EHRRSPLPSV DMKNESSSAK PAFQLVDLND QQNEENYCNN  1080
LNDQQLVPDN FLLQQSVFAA EKSRSYRKAL IGHRAEEMYV YRSLPLGQDR RRNRYWQFIS  1140
SPSRNDPGCG RIFVESCNGI WRLIDSEEGF DALLSCLDVR GIRESHLHSM LQSIGASFKE  1200
TARRNLLGSN SGFHNHDEVK KNVPEIRPKL DFSSGTDSPK SIVCASPSNS PGPSVSFSID  1260
LKNNCTEENE ITVRYKDYED WIWKECFDSN VLGAMKYGKL SRQRLLDICN HCHIVFSWED  1320
NHCPSCHGIY STSDKTFSFA EHVMQCKMKW SEEREGFLLN VSLPPRIRLL KAQLATIEAS  1380
VPSDAFECVW SDEYRKSWGM KLHMASTAEQ LLQSLTLLEG SIKTEFLSAN YETTSKILSS  1440
CKVTGRYADT FCAPEAVLVL PWIPQTTPAV ALRIMEIDTS IYYTSDQKAA HQKDNEAGSF  1500
IKFPSIYSAF GSSIDNVTQT GYLQQDNHWV DVGIGRTVLK RGRGRPRGPS RTSGVKSQKR  1560
SQNELHNLST RKDKFTRVPG WKGRTRPRGS TKKGRRSTRS RQKSATRTVA NVTEKRIVKD  1620
IVKDIVFDLA ETPAENEATE NVSSSERSEF DNDNDNGQAS ADEYDDPFVD ERVEYREVDE  1680
CIEDGHEGNY DDDYNDDEDE GDDYYTEGYV NSDFQEEGIQ TRGQRQIGNV DGSPDRGLGS  1740
SSSSSEYSY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G44180.1	0.0	HB-other family protein