PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN03718.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | MYB_related | ||||||||
Protein Properties | Length: 274aa MW: 29966.9 Da PI: 7.7463 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 44.8 | 2.8e-14 | 32 | 76 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r +WT+eE++++++a +++ + Wk+I +g +t q++s+ qky PIN03718.1 32 RESWTEEEHDKFLEALQLFDRD-WKKIEDFVG-SKTVIQIRSHAQKY 76 789*****************77.*********.*************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 274 aa Download sequence |
MNSTSSNPPP PPPSGDGSGK KVRKPYTITK SRESWTEEEH DKFLEALQLF DRDWKKIEDF 60 VGSKTVIQIR SHAQKYFLKV QKNGTVAHVP PPRPKRKAAH PYPQKAPKNV LVPLQASVAY 120 PTASVNSLAP GYPTWDDASV LVSHPSSGTI PSEKEYNILG AEADIGPKDA ARISNCSMSG 180 YGSSARTTPS SELPNQGKQG SVLQGIPDFA EVYSFIGSVF DPDTTDHVQK LKEMDPINLE 240 TVLLLMKNLT INLSSPDFEP IFTNMSAEKG SIFI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G09600.2 | 1e-107 | MYB_related family protein |