PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN03558.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

Trihelix

Protein Properties

Length: 593aa MW: 66268.1 Da PI: 6.8711

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN03558.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	97.8	9.8e-31	57	141	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW++qe+laL+++r++m+ +r+++lk+plWeevs+km+e gf+rs+k+Ckek+en+ k++k++k+g+ ++ ++ +t+++fdqlea PIN03558.1 57 RWPRQETLALLKIRSDMDVVFRDASLKGPLWEEVSRKMAELGFQRSAKKCKEKFENVYKYHKRTKDGRASK--PDGKTYRFFDQLEA 141 8******************************************************************95..77789*****85 PP
2	trihelix	103.8	1.2e-32	416	501	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW+k ev aLi++r++++ +++++ k+plWee+s++m + g++rs+k+Ckekwen+nk++kk+ke++kkr +e+s+tcpyf+ql+a PIN03558.1 416 RWPKAEVEALIKLRTSLDLKYQDNGPKGPLWEEISAAMGKLGYNRSAKRCKEKWENINKYFKKVKESNKKR-PEDSKTCPYFQQLDA 501 8*******************************************************************8.99*********85 PP

Sequence ? help Back to Top
Protein Sequence Length: 593 aa Download sequence
MMLGVSGLMG SSGDGAAIAA ETHESGGASG GSSEVGGSSS VPVEESERSG GGSGGNRWPR 60 QETLALLKIR SDMDVVFRDA SLKGPLWEEV SRKMAELGFQ RSAKKCKEKF ENVYKYHKRT 120 KDGRASKPDG KTYRFFDQLE ALENTSNPFT PPPQPPRPQP PSTATMAAPV NATNLPMLSH 180 VTVSSSSPTP LTIIPPQNAH NPMNSSPFQQ PIHQPPINAS THHHVSMSFL PNSTSSSTSS 240 DEDIQRRRGR KRKWKDYFER LMREVISKQE ELQKKFLDAL EKRERDRMAR EEAWRVQEMA 300 RINRDHELLV QERSVAAAKD AALIAFLQKL SDQNNLQIPI SNNAPQQVQP TQAQQPKNPQ 360 PPRQPPAPPT TQSTLPPPPE QPAQPPVAAP PITMVITPTK TDNGGDNFMI QPSPSRWPKA 420 EVEALIKLRT SLDLKYQDNG PKGPLWEEIS AAMGKLGYNR SAKRCKEKWE NINKYFKKVK 480 ESNKKRPEDS KTCPYFQQLD AIYKEKAKND AVVQSFNPGY PIKPENPMVP IMARPEQQWP 540 LPEQQQQDSV MHDNESNQNN EDDDEEDDDE EDDGGSYEII ANKQQSSLTN TVE

Sequence ? help Back to Top

Protein Sequence Length: 593 aa Download sequence

MMLGVSGLMG SSGDGAAIAA ETHESGGASG GSSEVGGSSS VPVEESERSG GGSGGNRWPR  60
QETLALLKIR SDMDVVFRDA SLKGPLWEEV SRKMAELGFQ RSAKKCKEKF ENVYKYHKRT  120
KDGRASKPDG KTYRFFDQLE ALENTSNPFT PPPQPPRPQP PSTATMAAPV NATNLPMLSH  180
VTVSSSSPTP LTIIPPQNAH NPMNSSPFQQ PIHQPPINAS THHHVSMSFL PNSTSSSTSS  240
DEDIQRRRGR KRKWKDYFER LMREVISKQE ELQKKFLDAL EKRERDRMAR EEAWRVQEMA  300
RINRDHELLV QERSVAAAKD AALIAFLQKL SDQNNLQIPI SNNAPQQVQP TQAQQPKNPQ  360
PPRQPPAPPT TQSTLPPPPE QPAQPPVAAP PITMVITPTK TDNGGDNFMI QPSPSRWPKA  420
EVEALIKLRT SLDLKYQDNG PKGPLWEEIS AAMGKLGYNR SAKRCKEKWE NINKYFKKVK  480
ESNKKRPEDS KTCPYFQQLD AIYKEKAKND AVVQSFNPGY PIKPENPMVP IMARPEQQWP  540
LPEQQQQDSV MHDNESNQNN EDDDEEDDDE EDDGGSYEII ANKQQSSLTN TVE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	247	253	RRGRKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76890.2	8e-67	Trihelix family protein