PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN03194.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family GRAS
Protein Properties Length: 480aa    MW: 54662.1 Da    PI: 6.4182
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN03194.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS459.52e-140684751374
        GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99 
                 l++lL+ cA++vssg+ e+a+  L+ +s+lasp gd+mqR+aayfteALa r+++ +++l kal++++ +   +++e+ ++klf+e +P+lk+s++++N
  PIN03194.1  68 LIHLLVVCANHVSSGSIENANVSLEYISHLASPVGDTMQRIAAYFTEALADRVLKGWPGLHKALNSTKIT--CVADEILVHKLFFEFCPFLKLSYVITN 164
                 689*************************************************************999998..6************************** PP

        GRAS 100 qaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkp 198
                 qaIle +e+e+ vHiiD++  +++QW++LlqaL++Rp+gpp+lRiTg+++    +ke l ++++rL+  Ae+l+vpf+f++ v+ rle+l++e+Lrvk+
  PIN03194.1 165 QAILETMEEEKVVHIIDLNSFEPTQWVTLLQALSARPQGPPHLRITGIHE----QKEVLDQMAHRLNAEAEKLDVPFQFHP-VVCRLENLDTESLRVKT 258
                 **************************************************....9**************************.6899************* PP

        GRAS 199 gEalaVnlvlqlhrll.............................................desvsleserdevLklvkslsPkvvvvveqeadhnses 252
                 gEa+a+++vlqlh+ll                                             ++s+++ s    +L+++++lsPk++vv+eqe++hn+ s
  PIN03194.1 259 GEAVAISSVLQLHTLLavddemlqnktanaahlqrvlqmnthtlgeflespdsassspkfsASSHKMIS----FLNALWGLSPKLMVVTEQESNHNGLS 353
                 ******************************************************998866666666666....************************** PP

        GRAS 253 FlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrv 351
                 +++r++eal++y+alfd+le+++pr+s er+k+E++l+g+ei+n++aceg er++rhe+l kW +rle aGF++vp+s++++ qa++ll+ ++ +gy++
  PIN03194.1 354 LMDRIMEALNFYAALFDCLESTVPRASIERQKIEKMLFGEEIRNIIACEGVERKKRHEKLDKWISRLELAGFGKVPFSYHVMLQARRLLQSYNYHGYKI 452
                 *************************************************************************************************** PP

        GRAS 352 eeesgslvlgWkdrpLvsvSaWr 374
                 +ee+g+++++W+d+pL+svSaWr
  PIN03194.1 453 KEENGCFMICWQDQPLFSVSAWR 475
                 **********************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 480 aa     Download sequence    
MQILFIYFMI SSEIYWFPLS IEMAQEEGSS SVSSSPLQMF SMMSLSPGLG SPYPWLREMK  60
SEERGLCLIH LLVVCANHVS SGSIENANVS LEYISHLASP VGDTMQRIAA YFTEALADRV  120
LKGWPGLHKA LNSTKITCVA DEILVHKLFF EFCPFLKLSY VITNQAILET MEEEKVVHII  180
DLNSFEPTQW VTLLQALSAR PQGPPHLRIT GIHEQKEVLD QMAHRLNAEA EKLDVPFQFH  240
PVVCRLENLD TESLRVKTGE AVAISSVLQL HTLLAVDDEM LQNKTANAAH LQRVLQMNTH  300
TLGEFLESPD SASSSPKFSA SSHKMISFLN ALWGLSPKLM VVTEQESNHN GLSLMDRIME  360
ALNFYAALFD CLESTVPRAS IERQKIEKML FGEEIRNIIA CEGVERKKRH EKLDKWISRL  420
ELAGFGKVPF SYHVMLQARR LLQSYNYHGY KIKEENGCFM ICWQDQPLFS VSAWRFRQYR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50420.10.0GRAS family protein