PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN03189.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family MYB
Protein Properties Length: 315aa    MW: 35415.7 Da    PI: 5.6969
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN03189.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding43.38.5e-141257146
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
                     +g+W +eEd+ l++ vk++G+++W++I ++  + Rt+k+c++rw +
       PIN03189.1 12 KGPWKAEEDKVLINHVKKYGPRNWSSIRSKGLLQRTGKSCRLRWVN 57
                     79*************************8887799**********87 PP
2Myb_DNA-binding41.14e-1368107344
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrw 44 
                      ++++eE+   +d+ +++G++ W++Ia ++  gRt++++k++w
       PIN03189.1  68 KFSAEEERTVIDLQAKFGNK-WARIATYLS-GRTDNDVKNFW 107
                      79******************.*********.*********** PP
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    
MVHFDEMGEI KKGPWKAEED KVLINHVKKY GPRNWSSIRS KGLLQRTGKS CRLRWVNKLR  60
PDLKSGVKFS AEEERTVIDL QAKFGNKWAR IATYLSGRTD NDVKNFWSSR QKRLARMLHN  120
SAPSSSSKSQ KSTKDVNVPS FRDVPSLPAP NFSSSTEEEF LAKSQSCSLS HIGDFETINM  180
ASFPVLEYPD VVGYEHSPFQ IEYTPPEKKP FIDQQSYPPF PSMSQLQPDF PLPLESQDYV  240
TRLGDPYFLD VFGQASGSAL GSAQIPIIPS FLSSESGANG ENQDAVTPDS CVFDDFPPID  300
MFDHIEPLPS PSDWP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G60460.15e-81MYB family protein