PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN03039.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

MYB

Protein Properties

Length: 537aa MW: 59438.2 Da PI: 7.5296

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN03039.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55	1.8e-17	59	105	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+eEde l +av+ + g++Wk+Ia+ ++ R++ qc +rwqk+l PIN03039.1 59 KGGWTPEEDETLRKAVATYRGKCWKKIAEFFP-DRSEVQCLHRWQKVL 105 688***************************.**********986 PP
2	Myb_DNA-binding	61.4	1.9e-19	111	157	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEde++ ++v+++G+ W+ Ia+ ++ gR +kqc++rw+++l PIN03039.1 111 KGPWTQEEDEKITELVAKYGPTKWSVIAKSLP-GRIGKQCRERWHNHL 157 79****************************.***********97 PP
3	Myb_DNA-binding	53.1	7.2e-17	163	206	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +++WT eE++ l++a++ +G++ W+ a+ ++ gRt++ +k++w++ PIN03039.1 163 KDAWTLEEELTLLNAHRIHGNK-WAELAKLLP-GRTDNAIKNHWNS 206 679*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 537 aa Download sequence
MAEVKSDDFC PENKESMAAS SSTVSENSSS VAPKSPGISS PASSSPAHRR TTGPIRRAKG 60 GWTPEEDETL RKAVATYRGK CWKKIAEFFP DRSEVQCLHR WQKVLNPELV KGPWTQEEDE 120 KITELVAKYG PTKWSVIAKS LPGRIGKQCR ERWHNHLNPY IKKDAWTLEE ELTLLNAHRI 180 HGNKWAELAK LLPGRTDNAI KNHWNSSLKK KLDFYLATGN LPPASKNVPL NGAADINRTA 240 SIGELLFGSN KGSNSMVLAS CGTPDSCKIE DGRDKPETMT RDHDITDPRH SETTNPECTT 300 CEEQMPSEVE TAHSDMDPKF ARDGICGEVD QYRIIGAPLH YDVSVHGTLC YEPPVLDSHG 360 QVHPNLANIS LVQSESDISP ATPPSSLFTP SSVNCGSLSA LSPESILRIA AKSYRNTPSI 420 ISRKRKSETP SPKERVLSNG HHNYTNTTEN TRLQSNSSCA DPTGDDDDGL SSSRSYNSSP 480 PYRLSFKRTS VQKSVEKQLD FATMEKDSCE NNAKTGDSEV KENPPVTKFV YTRQRRS

Sequence ? help Back to Top

Protein Sequence Length: 537 aa Download sequence

MAEVKSDDFC PENKESMAAS SSTVSENSSS VAPKSPGISS PASSSPAHRR TTGPIRRAKG  60
GWTPEEDETL RKAVATYRGK CWKKIAEFFP DRSEVQCLHR WQKVLNPELV KGPWTQEEDE  120
KITELVAKYG PTKWSVIAKS LPGRIGKQCR ERWHNHLNPY IKKDAWTLEE ELTLLNAHRI  180
HGNKWAELAK LLPGRTDNAI KNHWNSSLKK KLDFYLATGN LPPASKNVPL NGAADINRTA  240
SIGELLFGSN KGSNSMVLAS CGTPDSCKIE DGRDKPETMT RDHDITDPRH SETTNPECTT  300
CEEQMPSEVE TAHSDMDPKF ARDGICGEVD QYRIIGAPLH YDVSVHGTLC YEPPVLDSHG  360
QVHPNLANIS LVQSESDISP ATPPSSLFTP SSVNCGSLSA LSPESILRIA AKSYRNTPSI  420
ISRKRKSETP SPKERVLSNG HHNYTNTTEN TRLQSNSSCA DPTGDDDDGL SSSRSYNSSP  480
PYRLSFKRTS VQKSVEKQLD FATMEKDSCE NNAKTGDSEV KENPPVTKFV YTRQRRS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	422	427	SRKRKS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G02320.2	1e-124	MYB family protein