PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN02681.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

GRF

Protein Properties

Length: 277aa MW: 30985.3 Da PI: 7.1926

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN02681.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	75.3	6.5e-24	48	92	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCs+++ +++k+CErH+hrgr+rsrk++e+ PIN02681.1 48 DPEPGRCRRTDGKKWRCSKEAHSDSKYCERHMHRGRNRSRKPVES 92 79****************************************986 PP
2	QLQ	25	5.8e-10	1	22	16	37
QLQ 16 lAyKyLaanqPvPpeLlqaiqk 37 ++yKyL+a++PvPp+L++ i++ PIN02681.1 1 MVYKYLVAGLPVPPDLVLLIRR 22 79****************9985 PP

Sequence ? help Back to Top
Protein Sequence Length: 277 aa Download sequence
MVYKYLVAGL PVPPDLVLLI RRSYEAISAL HFHHPSLGCN SYYGKKFDPE PGRCRRTDGK 60 KWRCSKEAHS DSKYCERHMH RGRNRSRKPV ESQSTSQFLP IAVTHVSTRC SDNSGSFQHM 120 PFYSVVSSQG SSFGSNNKES RYIHGPTADT NEHGFPLEAS GSVSLGSRAG NDTMQLMPSQ 180 VSLFKQKSDC NLLGHSSAQF ESIDLSKQPQ LGQHCFFESN DIGSPEEQQP VHLFFNEWPT 240 TKEESWSNLD DDHNGNVFSS TQLSISIPTT AYTTNDA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	2e-35	GRF family protein