PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN02407.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family C2H2
Protein Properties Length: 267aa    MW: 28200.2 Da    PI: 8.3003
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN02407.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.10.00029138160123
                 EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                 ykC+ C+k F ++  L  H  +H
  PIN02407.1 138 YKCNLCDKAFASSQALGGHKTSH 160
                 9*************999998877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 267 aa     Download sequence    
MLPTLSPATQ PQQGRSFSDD VTDSWERKRK RSHPTPLRDY ESKEKCVAEC LILLSLSGGG  60
LCLSSSSSAI GAVEEESNST ANKDQESSPT TAAAFVDDDK NQETSSSADP TASATVEAKK  120
QQEFHPAALP PPPQVKSYKC NLCDKAFASS QALGGHKTSH RAKAPATAVP EDTNHSRSVS  180
PGGKRHECSI CREVFQTGLA LGGHKRKHYE GKIGRNAAKN AKTDEHSDGG GGATTHVTAA  240
TSGSTTNAGS VVLTLFGKRI LVEQKLN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12833KRKRSH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19580.27e-25C2H2 family protein