PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN02364.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

HB-other

Protein Properties

Length: 931aa MW: 104549 Da PI: 8.4977

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN02364.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	17.2	9e-06	68	124	1	57
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 +r+R ++++ ++ + +F + +s++e +e++++ g+t +qV+ +F +R + +k PIN02364.1 68 KRPRDLLNPKAVKYMHLVFSIKDAISKRETREISAQFGVTVTQVRDFFTGQRSRVRK 124 79999************************************************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 931 aa Download sequence
MEFSKETQLM ELAAPSKSYQ DLLDAQRDLF QNQIEKLQQI VATQCKLTGV NPLSQEMAAG 60 ALSIKIGKRP RDLLNPKAVK YMHLVFSIKD AISKRETREI SAQFGVTVTQ VRDFFTGQRS 120 RVRKFVRLSR ERADNSSACN GMRDDVTSTL GLDMPLEPVP LDTMAPANND EGPSCSRRHE 180 VLSGVEESER DFIENIFSLM RKEESFGGQV KLLRWILRIK NPSTLNWFLT EGGLMILATW 240 LSEAAKEEQT NFLQVILKVL DYLPLHKALP VHMSAILQSV NRLRFYRKSD ISHRARDLLS 300 KWSNMLEKNL ALKKSNGLKS ASDLQDEMLL KQSISEVMDK ESWDSRDGNS EEALRVLCDN 360 PDNHRKLDTA QPLKLLTASG DDSNKRRGVL SSHTRERRKV QMVEQPGQRS AARSSQVARS 420 TTATQSRPLS ADDIQKAKMR AQFMQSKYAK TNTRDEKVKP ESHNRCTPSH SSLSPPVSKA 480 CSRTELEEQQ KHDNSFSKLA NPQETCTLNL EEPLWKKYKR IQIPWRTPAE FKIRETWAVA 540 DGANSKEVEV QKNRTRRERE IFCRMTQEIP SDPREPWDRE IDYDDTLTPE VPIEQLPDVE 600 PLETASNDTK DTIAPVASTS SESMPEPDLE LLAELLKNPE LVFALTSGQA AGLSSYETVK 660 LLDMIKVKGA SSLSNLAGNS DGKVEVSLPS PTPSSDPVLN GPRPDFSRNP FSRQHNGLLP 720 ATGAALPARP QMVVPASTLT QPQIPATTIL APQPPAVVMP PSSLQTYGDI NPQMHHHNSF 780 NIQHLTTQMM VNANTVVKSN RAPSNLVAAS SPSIWNEPLG NIQPLGSTSI QPSQSYTPPQ 840 SSYYQNNRNV NNYNAYAAGP VQAVASWGGG KNVVEQRSDF ESWSPDNSPS RRHEYLPGQY 900 YRESSPNVRH GYRQPSGYQD HSSEQWRDYR R

Sequence ? help Back to Top

Protein Sequence Length: 931 aa Download sequence

MEFSKETQLM ELAAPSKSYQ DLLDAQRDLF QNQIEKLQQI VATQCKLTGV NPLSQEMAAG  60
ALSIKIGKRP RDLLNPKAVK YMHLVFSIKD AISKRETREI SAQFGVTVTQ VRDFFTGQRS  120
RVRKFVRLSR ERADNSSACN GMRDDVTSTL GLDMPLEPVP LDTMAPANND EGPSCSRRHE  180
VLSGVEESER DFIENIFSLM RKEESFGGQV KLLRWILRIK NPSTLNWFLT EGGLMILATW  240
LSEAAKEEQT NFLQVILKVL DYLPLHKALP VHMSAILQSV NRLRFYRKSD ISHRARDLLS  300
KWSNMLEKNL ALKKSNGLKS ASDLQDEMLL KQSISEVMDK ESWDSRDGNS EEALRVLCDN  360
PDNHRKLDTA QPLKLLTASG DDSNKRRGVL SSHTRERRKV QMVEQPGQRS AARSSQVARS  420
TTATQSRPLS ADDIQKAKMR AQFMQSKYAK TNTRDEKVKP ESHNRCTPSH SSLSPPVSKA  480
CSRTELEEQQ KHDNSFSKLA NPQETCTLNL EEPLWKKYKR IQIPWRTPAE FKIRETWAVA  540
DGANSKEVEV QKNRTRRERE IFCRMTQEIP SDPREPWDRE IDYDDTLTPE VPIEQLPDVE  600
PLETASNDTK DTIAPVASTS SESMPEPDLE LLAELLKNPE LVFALTSGQA AGLSSYETVK  660
LLDMIKVKGA SSLSNLAGNS DGKVEVSLPS PTPSSDPVLN GPRPDFSRNP FSRQHNGLLP  720
ATGAALPARP QMVVPASTLT QPQIPATTIL APQPPAVVMP PSSLQTYGDI NPQMHHHNSF  780
NIQHLTTQMM VNANTVVKSN RAPSNLVAAS SPSIWNEPLG NIQPLGSTSI QPSQSYTPPQ  840
SSYYQNNRNV NNYNAYAAGP VQAVASWGGG KNVVEQRSDF ESWSPDNSPS RRHEYLPGQY  900
YRESSPNVRH GYRQPSGYQD HSSEQWRDYR R

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G02560.2	1e-143	HB-other family protein