PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN02355.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | bHLH | ||||||||
Protein Properties | Length: 238aa MW: 26107.5 Da PI: 8.4455 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 36.9 | 6.5e-12 | 80 | 127 | 4 | 54 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++ rE++RRdr+N++f eL ll + + +K +Ka+iL Av+ + +L PIN02355.1 80 SKACREKQRRDRLNDKFMELGALLEPG---RPPKTDKAAILVDAVRMVTQL 127 5678**********************8...89**************99988 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 238 aa Download sequence |
MVSPENTNWL YDYGIEDIHV HDGNFSAPSS GFSWPTQALN GSSNVSNSVE IDGSIGESDV 60 PKETGSKKRA RPEPSAPSSS KACREKQRRD RLNDKFMELG ALLEPGRPPK TDKAAILVDA 120 VRMVTQLRGE AQKLKDSNLN LQEKIKELKA EKNELRDEKQ RLKAEKEKLE QQLKTMNAPQ 180 PGFLPSPPAI PAAFAAQTQG AGNKLVPIIS YPGVGMWQFM PPAAVDTSQD HVLRPPVA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G54680.1 | 6e-93 | bHLH family protein |