PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN02157.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

WRKY

Protein Properties

Length: 470aa MW: 52665.6 Da PI: 6.6018

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN02157.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	95.8	3.1e-30	272	330	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +Dg++WrKYGqK+ kg+++pr+YYrCt+ gCpv+k+v+r+aed++v+++tYeg+Hnh+ PIN02157.1 272 SDGCQWRKYGQKMAKGNPCPRAYYRCTMGvGCPVRKQVQRCAEDQSVLTTTYEGRHNHP 330 7*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 470 aa Download sequence
MEQGFNHQSI ILNSFDMDQV SRVDHREKRV VSEMDFFTEK KNCDDTDVEL IKEESQQGRQ 60 LHSDDHINTG LNLLTTNTIL NREKPDMDQN DRSQEVGGRT SNTEFVVLKA ELDRMNTENE 120 RLRAIVNQIN DKCYSLKMNI MSLLHRQQNP GTENKSDQDH KMINSMVAEE EKIRKHIIDF 180 GQRESVDDQD PGSNNQDCSS SPSGKEEMSS GLMQKISSKT KTKREESPEK NFQEWISKKV 240 AEPHSFDHRT AEATMKKARV SVRARSEAPT ISDGCQWRKY GQKMAKGNPC PRAYYRCTMG 300 VGCPVRKQVQ RCAEDQSVLT TTYEGRHNHP LPPAAMAMAS TTSAAASMLL SGYMQSADRP 360 HNPNHMLPYP QNMATISASS PFPTVTLDLT SNSRSPGDIF HAPFLNHHQE HVMALNQSEN 420 SGNNSQEIVN AATAAIAADP KFTAAVAAAI NSIMRNGHLN DNVVEDQKSS

Sequence ? help Back to Top

Protein Sequence Length: 470 aa Download sequence

MEQGFNHQSI ILNSFDMDQV SRVDHREKRV VSEMDFFTEK KNCDDTDVEL IKEESQQGRQ  60
LHSDDHINTG LNLLTTNTIL NREKPDMDQN DRSQEVGGRT SNTEFVVLKA ELDRMNTENE  120
RLRAIVNQIN DKCYSLKMNI MSLLHRQQNP GTENKSDQDH KMINSMVAEE EKIRKHIIDF  180
GQRESVDDQD PGSNNQDCSS SPSGKEEMSS GLMQKISSKT KTKREESPEK NFQEWISKKV  240
AEPHSFDHRT AEATMKKARV SVRARSEAPT ISDGCQWRKY GQKMAKGNPC PRAYYRCTMG  300
VGCPVRKQVQ RCAEDQSVLT TTYEGRHNHP LPPAAMAMAS TTSAAASMLL SGYMQSADRP  360
HNPNHMLPYP QNMATISASS PFPTVTLDLT SNSRSPGDIF HAPFLNHHQE HVMALNQSEN  420
SGNNSQEIVN AATAAIAADP KFTAAVAAAI NSIMRNGHLN DNVVEDQKSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62300.1	1e-77	WRKY family protein