PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN02136.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | C3H | ||||||||
Protein Properties | Length: 434aa MW: 46806.5 Da PI: 9.4529 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 19.1 | 2.4e-06 | 5 | 25 | 5 | 26 |
--SGGGGTS--TTTTT-SS-SS CS zf-CCCH 5 lCrffartGtCkyGdrCkFaHg 26 +Cr++++ G C+ G++C+F+H+ PIN02136.1 5 PCRHYLQ-GRCHEGEKCNFSHD 25 8******.*************6 PP | |||||||
2 | zf-CCCH | 23 | 1.4e-07 | 59 | 79 | 5 | 25 |
--SGGGGTS--TTTTT-SS-S CS zf-CCCH 5 lCrffartGtCkyGdrCkFaH 25 +C+++ +G+C++G+ C F+H PIN02136.1 59 PCNNYTTNGFCSRGSDCLFSH 79 7******************** PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 434 aa Download sequence |
MIKTPCRHYL QGRCHEGEKC NFSHDAVPLT KSQPCRYFAC HTCMKGDDCP FDHQLSKYPC 60 NNYTTNGFCS RGSDCLFSHE IPAKQSFPVT PNVSKPELTC VKGGSSTISK FTKPEAKFPS 120 QLNNSNSSKH TDNSGIFHQK VDAKFSSAGN SPGMSAELVG AKAVPRTTGL TPKGVSFLSN 180 GGMSLVDRSR HKRDTSVKDN VGIDVSCKTI LKMPGNVNKL SNMSDGVASR KPRGINFLSF 240 THPSSDGSVG EMFSDLLSNS NNEAGKSVLD DMGKGELACS LPQSVGMLKV NRQMNQSATN 300 LVPASNEKVN GTPSRVPQHI NFLNFDRISA DGAILKEGGK SPSSKDETAL SFVKERRNTQ 360 GDLQEATKRP SLSFDELTGQ STSGHNANLS TYFKTSLLSN TPSSVQKAVQ SALSFAAKFE 420 SNIKVGSSLH QQRS |