PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN01986.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family GRAS
Protein Properties Length: 464aa    MW: 52391.3 Da    PI: 6.203
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN01986.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS456.81.3e-139464611374
        GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99 
                 l++lL++cA++v+sg++e+a+ +L ++s+lasp+gd+mqR+a+yf eALa r++r+++++yka+++++ s   ++ee+ ++k+f+e  P++k +++++N
  PIN01986.1  46 LIHLLVTCANHVASGSFENANIALDQISHLASPEGDTMQRIASYFSEALADRILRTWPGVYKAFNSTRIS--VVAEEILVRKMFFEYLPFMKAAFVITN 142
                 689*************************************************************999997..6************************** PP

        GRAS 100 qaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkp 198
                 qaI+ea+ege+ vH+iD+++++++QW aL++ L++Rpegpp+lRiTgv++    +ke le++++ L++ Ae+l++pf+f++ ++++le+l++e+Lrvk+
  PIN01986.1 143 QAIVEAMEGEKVVHVIDLNANEPAQWCALIRDLSARPEGPPHLRITGVHQ----RKEVLEQMAHILTEEAEKLDLPFQFHP-IVSKLENLDFEKLRVKT 236
                 **************************************************....9**************************.7999************* PP

        GRAS 199 gEalaVnlvlqlhrll..................................................desvsleserdevLklvkslsPkvvvvveqead 247
                 gEala+++++qlh+ll                                                   +s++++ ++d++L ++++lsPk++ v+eq++d
  PIN01986.1 237 GEALAISSIMQLHTLLacdndkkspnaigvhlqrvahmnqstlrelldkdmvnvyspsndstssspLSSAASP-NIDSFLGALWGLSPKIMLVTEQDSD 334
                 ***********************************************************99886553333333.589********************** PP

        GRAS 248 hnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvks 346
                 hns++++er+ e+l++y+alfd+le+ lp+ s er k+E++llg ei+nv+aceg er+erhe+lekW++r+e aGF +v+ls+ a+ qak+ll+ ++ 
  PIN01986.1 335 HNSKNLMERLYESLYFYAALFDCLESALPKMSLERLKMEKMLLGDEIKNVIACEGVERKERHEKLEKWSQRFELAGFASVKLSYCAMLQAKRLLQSYNC 433
                 *************************************************************************************************** PP

        GRAS 347 dgyrveeesgslvlgWkdrpLvsvSaWr 374
                 dgy+ +ee+gs+v++W+drpL++vSaWr
  PIN01986.1 434 DGYKSKEENGSVVICWQDRPLFAVSAWR 461
                 ***************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 464 aa     Download sequence    
MLQEDGSSSV TSSPLQMIPM MSLSPGMVSA YPWVKELKPE ERGLYLIHLL VTCANHVASG  60
SFENANIALD QISHLASPEG DTMQRIASYF SEALADRILR TWPGVYKAFN STRISVVAEE  120
ILVRKMFFEY LPFMKAAFVI TNQAIVEAME GEKVVHVIDL NANEPAQWCA LIRDLSARPE  180
GPPHLRITGV HQRKEVLEQM AHILTEEAEK LDLPFQFHPI VSKLENLDFE KLRVKTGEAL  240
AISSIMQLHT LLACDNDKKS PNAIGVHLQR VAHMNQSTLR ELLDKDMVNV YSPSNDSTSS  300
SPLSSAASPN IDSFLGALWG LSPKIMLVTE QDSDHNSKNL MERLYESLYF YAALFDCLES  360
ALPKMSLERL KMEKMLLGDE IKNVIACEGV ERKERHEKLE KWSQRFELAG FASVKLSYCA  420
MLQAKRLLQS YNCDGYKSKE ENGSVVICWQ DRPLFAVSAW RFRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50420.10.0GRAS family protein