PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN01824.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

bHLH

Protein Properties

Length: 467aa MW: 52379.1 Da PI: 5.9166

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN01824.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	50.2	4.6e-16	292	338	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn ErrRRdriN+++ L+el+P++ K +Ka++L +A+eY+ksLq PIN01824.1 292 VHNLSERRRRDRINEKMRALQELIPHS-----NKSDKASMLDEAIEYMKSLQ 338 5***********************7.....59***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 467 aa Download sequence
MDTCLPDWNT EVGVEFPVPN QRKSLGLDNE LVELLWQNGE VVLHSQNHRK QGYDPSKPRQ 60 VHKNNDPTIS GANENPTNLL QDDETVSWIN YPIDESFEKE FCSNFLSEIP SSTPLEPVKN 120 SEKVPKFSAS QVNQDFASVP LPPPRFDAFD QHQNLPVKRQ AFPQTTQGEV HECSMRTIGS 180 SHCASNQVVN DVDMSWESSR TLEENYAQKV SPQYESTERE THGQAITSSS GGSGSSIWKT 240 SSQSNDTNRH KRKSRDMEES ECRSDATELE SAAANKSSQK SGTTRRSRVA EVHNLSERRR 300 RDRINEKMRA LQELIPHSNK SDKASMLDEA IEYMKSLQFQ LQLMWMGSGM APMMLPGMQH 360 YMSRVGMGIG SPMLPAIQNL MRLSRLPLVD QVSPNPNQTQ IGQGPVLGPV NYQNQMQNSS 420 FPEQYANYMG FHSMPNTSQP INMFNFGPHS SQQNQESVPP GNGSGST

Sequence ? help Back to Top

Protein Sequence Length: 467 aa Download sequence

MDTCLPDWNT EVGVEFPVPN QRKSLGLDNE LVELLWQNGE VVLHSQNHRK QGYDPSKPRQ  60
VHKNNDPTIS GANENPTNLL QDDETVSWIN YPIDESFEKE FCSNFLSEIP SSTPLEPVKN  120
SEKVPKFSAS QVNQDFASVP LPPPRFDAFD QHQNLPVKRQ AFPQTTQGEV HECSMRTIGS  180
SHCASNQVVN DVDMSWESSR TLEENYAQKV SPQYESTERE THGQAITSSS GGSGSSIWKT  240
SSQSNDTNRH KRKSRDMEES ECRSDATELE SAAANKSSQK SGTTRRSRVA EVHNLSERRR  300
RDRINEKMRA LQELIPHSNK SDKASMLDEA IEYMKSLQFQ LQLMWMGSGM APMMLPGMQH  360
YMSRVGMGIG SPMLPAIQNL MRLSRLPLVD QVSPNPNQTQ IGQGPVLGPV NYQNQMQNSS  420
FPEQYANYMG FHSMPNTSQP INMFNFGPHS SQQNQESVPP GNGSGST

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	297	302	ERRRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G43010.2	2e-59	bHLH family protein