PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN01535.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family MYB
Protein Properties Length: 271aa    MW: 30906 Da    PI: 8.4683
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN01535.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding49.69.4e-161360148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+W++eEd++l d++ ++G  +Wk+ ++  g++R++k+c++rw +yl
       PIN01535.1 13 KGAWSEEEDKKLRDYILRYGHWNWKLLPKFAGLKRCGKSCRLRWMNYL 60
                     79******************99************************97 PP
2Myb_DNA-binding56.37.4e-1866111148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg++T+eE+el+ +++ +lG++ W++Ia++++ gRt++++k++w+++l
       PIN01535.1  66 RGNFTKEEEELISKLHDELGNK-WSAIAAKLP-GRTDNEIKNFWHTHL 111
                      89********************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    
MRTPCIDKNG LKKGAWSEEE DKKLRDYILR YGHWNWKLLP KFAGLKRCGK SCRLRWMNYL  60
RPGIKRGNFT KEEEELISKL HDELGNKWSA IAAKLPGRTD NEIKNFWHTH LKKRSKTTAA  120
NSTQHSPRIT YNCKISQEAL AGADLNCKDS QEALAGADLN CKNSQEALAG ADLASEAQKF  180
SRKDCASSSQ LAQQLKISCL SENQLKAETY EQVKLLQDRI NDERVSTYAD PFGGFQECFW  240
TEPFLLDTSY GQGDGFSWLH EWGFLPGYLL I
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G21440.13e-60MYB family protein