PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN01531.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | MYB_related | ||||||||
Protein Properties | Length: 98aa MW: 11688.5 Da PI: 10.0606 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 50.8 | 4e-16 | 13 | 60 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd++l d++ ++G +W++ +++ g++R++k+c++rw ++l PIN01531.1 13 KGAWSEEEDQKLRDYILRYGHWNWRLLPKYAGLKRCGKSCRLRWMNHL 60 79******************99************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 98 aa Download sequence |
MRTPCIDKNG LKKGAWSEEE DQKLRDYILR YGHWNWRLLP KYAGLKRCGK SCRLRWMNHL 60 RPGIKRGNYT KEEEELIAKL HDEIGNKYAL NGFSHLFP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G21440.1 | 4e-41 | MYB family protein |