PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN01237.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | BBR-BPC | ||||||||
Protein Properties | Length: 94aa MW: 10329 Da PI: 10.2034 | ||||||||
Description | BBR-BPC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GAGA_bind | 228 | 7.8e-70 | 1 | 94 | 208 | 301 |
GAGA_bind 208 lPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekLaaeGydlsnpvDLkdhWAkHGtnkfvtir 301 +PvPvCsCtG+lr CYkWGnGGWqS+CCtt++S+yPLP+++++r+aR++grKmS++af+klL++LaaeG+dlsn+vDLk+hWAkHGtn+++ti+ PIN01237.1 1 MPVPVCSCTGVLRPCYKWGNGGWQSSCCTTNLSMYPLPAVPNKRHARVGGRKMSGSAFNKLLSRLAAEGHDLSNAVDLKEHWAKHGTNRYITIK 94 9********************************************************************************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 94 aa Download sequence |
MPVPVCSCTG VLRPCYKWGN GGWQSSCCTT NLSMYPLPAV PNKRHARVGG RKMSGSAFNK 60 LLSRLAAEGH DLSNAVDLKE HWAKHGTNRY ITIK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G42520.3 | 1e-62 | BBR-BPC family protein |