PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN01217.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

bHLH

Protein Properties

Length: 407aa MW: 44586.1 Da PI: 5.7615

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN01217.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	18.8	3e-06	298	335	12	54
HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 R +++ +++ L++l+ + +K + a++L +A+eYIk+L PIN01217.1 298 RKEKLGDRITALQQLVSPF-----GKTDTASVLHEAIEYIKYL 335 677888999*****998.....8***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 407 aa Download sequence
MAEEFQGGIC GGNWWSTSRT LFGSSPCSLA TNDFGWMNHN PIIDMKTTRS SDDSAGSASD 60 GSSSLVLQDA RFSSATNPDA WNQDFLHDSG RSDQTYSNIN LQEGAGLDWS SKNFSEQSSF 120 NSFRQMNQSF PLEEPPLNSI SNSTGFPLNS TSYSYTSSLL QTLFDTDSQP QQALLDNQAI 180 NYSSVSSSAA NYDQVNNSNE SFLPGLTRAA PVINPSFAKQ NPITNLPFTN NANAPLWNAQ 240 FLPSSLNKKP NLPTFSTTKQ QNEAARNLGS AAKKANNEPA LKRPRIETPS PLPTFKVRKE 300 KLGDRITALQ QLVSPFGKTD TASVLHEAIE YIKYLHDQVS VYSAPYLKNG SSPLQRQQAG 360 DKPKDQERQI QDLKSRGLCL VPISSTFPVA AETTADFWTP TFGGNFK

Sequence ? help Back to Top

Protein Sequence Length: 407 aa Download sequence

MAEEFQGGIC GGNWWSTSRT LFGSSPCSLA TNDFGWMNHN PIIDMKTTRS SDDSAGSASD  60
GSSSLVLQDA RFSSATNPDA WNQDFLHDSG RSDQTYSNIN LQEGAGLDWS SKNFSEQSSF  120
NSFRQMNQSF PLEEPPLNSI SNSTGFPLNS TSYSYTSSLL QTLFDTDSQP QQALLDNQAI  180
NYSSVSSSAA NYDQVNNSNE SFLPGLTRAA PVINPSFAKQ NPITNLPFTN NANAPLWNAQ  240
FLPSSLNKKP NLPTFSTTKQ QNEAARNLGS AAKKANNEPA LKRPRIETPS PLPTFKVRKE  300
KLGDRITALQ QLVSPFGKTD TASVLHEAIE YIKYLHDQVS VYSAPYLKNG SSPLQRQQAG  360
DKPKDQERQI QDLKSRGLCL VPISSTFPVA AETTADFWTP TFGGNFK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G61660.3	1e-60	bHLH family protein