PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN01206.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

MYB

Protein Properties

Length: 267aa MW: 30331.5 Da PI: 5.7278

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN01206.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.1	1.8e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++lv +++q G g+W+ +++ g+ R++k+c++rw +yl PIN01206.1 14 KGPWTAEEDLILVSYINQNGHGNWRNLPKRAGLLRCGKSCRLRWMNYL 61 79****************************99**********97 PP
2	Myb_DNA-binding	48.5	2e-15	67	117	1	48
TSSS-HHHHHHHHHHHHHTTTT....-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg....tWktIartmgkgRtlkqcksrwqkyl 48 rg+++ eE+e +++++++lG++ W+ Ia++++ gRt++++k+ w+++l PIN01206.1 67 RGNFSREEEETIIKLHQELGNRkqrgEWSVIAARLP-GRTDNEIKNVWNTHL 117 89********************************.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 267 aa Download sequence
MGRAPCCQKM GLKKGPWTAE EDLILVSYIN QNGHGNWRNL PKRAGLLRCG KSCRLRWMNY 60 LRPDIKRGNF SREEEETIIK LHQELGNRKQ RGEWSVIAAR LPGRTDNEIK NVWNTHLKKR 120 LNQNSQPESK PEPEPKNQMP APESSDFHRK RKDTDSGSNS PLHSSSENSS LTNTASSEGT 180 AAYTDGVNSY MMVDSLDNNL PEVDESFWSE VFSGNDSSAT SDFLTGNIDF PLQFSNSFGS 240 DLNRDGGTDF WYNLFNRVDE FVDLPEF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G23250.1	2e-70	MYB family protein