PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN01151.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | MYB | ||||||||
Protein Properties | Length: 255aa MW: 27245.5 Da PI: 9.0554 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 55.9 | 9.7e-18 | 15 | 60 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W ++Ed l+++v+++G+++W++I++ ++ gR++k+c++rw + PIN01151.1 15 KGSWNPQEDAALIKLVEEHGPRNWSLISSGIP-GRSGKSCRLRWCNQ 60 799*****************************.***********985 PP | |||||||
2 | Myb_DNA-binding | 50.2 | 5.9e-16 | 69 | 111 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++T+ Ed ++++++ +G++ W+tIar ++ gRt++ +k++w++ PIN01151.1 69 PFTAAEDAMILRVHAIHGNR-WATIARQLP-GRTDNAIKNHWNST 111 89******************.*********.***********986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 255 aa Download sequence |
MAESHGGSGG GGKIKGSWNP QEDAALIKLV EEHGPRNWSL ISSGIPGRSG KSCRLRWCNQ 60 LSPTVQHRPF TAAEDAMILR VHAIHGNRWA TIARQLPGRT DNAIKNHWNS TLRRRRNFCG 120 GGGGVAGRRR SSEESGSGSS EKRQCSRASQ EQSSYSGDEN GSGGDGLTLT LLPPGGGVMQ 180 LHAGEEEVKE KEELQMIRGE GGGDLTVGIG DTCLVTVIQR MIAQEVRKYF EKLRAQGGLG 240 LGIGPGLEAV VQKDP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37260.1 | 5e-47 | MYB family protein |