PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN01019.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | GATA | ||||||||
Protein Properties | Length: 130aa MW: 14532.9 Da PI: 10.6202 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 57.5 | 1.8e-18 | 24 | 58 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 Cs C+tt TplWR gp g+k+LCnaCG++y kk++ PIN01019.1 24 CSDCHTTRTPLWRGGPAGPKSLCNACGIKYNKKRR 58 ********************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 130 aa Download sequence |
MDLKVDKKAD SEEKNHNSSS LKSCSDCHTT RTPLWRGGPA GPKSLCNACG IKYNKKRRQL 60 LGLDTGRSNK KKKRTSVNRS NEVREILKMR FMALGSDMLL QRSGKLMSKL REEEQAAILL 120 MALSCGSVYA |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 55 | 74 | KKRRQLLGLDTGRSNKKKKR |
2 | 56 | 75 | KKRRQLLGLDTGRSNKKKKR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G06740.1 | 1e-34 | GATA family protein |