PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN00957.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | MYB_related | ||||||||
Protein Properties | Length: 167aa MW: 18736.4 Da PI: 4.8067 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 25.6 | 2.9e-08 | 3 | 26 | 23 | 47 |
-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 23 tWktIartmgkgRtlkqcksrwqky 47 W++Ia +++ gRt++++k++w+++ PIN00957.1 3 IWSLIAGRLP-GRTANDVKNFWNTH 26 5*********.************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 167 aa Download sequence |
MHIWSLIAGR LPGRTANDVK NFWNTHIEKK INSAGAGLVL GRETKKTITE SNIIRPRPRT 60 FSTLQVPGFP NITDHQQSKP NSENHNDKQQ PSSSTASLSQ DQDTINDSTN DDPDECIRWW 120 SELLKITENG ERTPFSFSNE DYQIILSPGL GDANDYADQD GTFSSYP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G56650.1 | 1e-14 | MYB family protein |