PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN00952.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

WRKY

Protein Properties

Length: 504aa MW: 56130.9 Da PI: 6.0273

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN00952.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	80.2	2.2e-25	198	253	3	59
-SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 DgynWrKYGqK+vk+ e +rsYYrCt+++C +kk +e++++ ++++ei+Y++eHnh+ PIN00952.1 198 DGYNWRKYGQKQVKSPEGSRSYYRCTFSECYAKK-IECCDRSNRIIEIVYRSEHNHD 253 9*****************************98.*******************7 PP
2	WRKY	99.2	2.6e-31	371	427	3	59
-SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 Dgy+WrKYGqK+vkg+++pr+YYrCtsagCpv+k++er+ +++++v+itY+g H+h+ PIN00952.1 371 DGYRWRKYGQKMVKGNPHPRNYYRCTSAGCPVRKHIERAVDNTSAVVITYKGVHDHD 427 9*******************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 504 aa Download sequence
MEEENNRSSP EKMEEGNSKP PDEEEEEENQ EENFEKNNEQ RRVNENNSSN CSADRTSVGE 60 RGELRGSQSE NLTSTKMCES IFQSDYKESS ELLSEVPVEY SLQPLQSVEE LKDQARAVHK 120 EPVSGSQAQV QAPDDPSKLK ASSTSVTLSI SSIPSRTPPE KKLQSTENGN SPCLTEHDKQ 180 NSVDQKPLSA VSVLKTPDGY NWRKYGQKQV KSPEGSRSYY RCTFSECYAK KIECCDRSNR 240 IIEIVYRSEH NHDPPQKVNC AKENRPAVPN VPVNGTVDGT HPVRGLNDPV PSTSSKEPSP 300 LIDQTTEIKQ QDSCDSDETT EINVKEEHVD GPEYKRRQKR SSTIEFGSLP KTGKKPKFVV 360 HAAGDMGISG DGYRWRKYGQ KMVKGNPHPR NYYRCTSAGC PVRKHIERAV DNTSAVVITY 420 KGVHDHDMPV PRKRPSCKSS SVVAATPVSA ENLQINKTEP DPSQTQWSVD KEGELTGEAL 480 NVGAEKKSES ARTLLSIGFE IKPC

Sequence ? help Back to Top

Protein Sequence Length: 504 aa Download sequence

MEEENNRSSP EKMEEGNSKP PDEEEEEENQ EENFEKNNEQ RRVNENNSSN CSADRTSVGE  60
RGELRGSQSE NLTSTKMCES IFQSDYKESS ELLSEVPVEY SLQPLQSVEE LKDQARAVHK  120
EPVSGSQAQV QAPDDPSKLK ASSTSVTLSI SSIPSRTPPE KKLQSTENGN SPCLTEHDKQ  180
NSVDQKPLSA VSVLKTPDGY NWRKYGQKQV KSPEGSRSYY RCTFSECYAK KIECCDRSNR  240
IIEIVYRSEH NHDPPQKVNC AKENRPAVPN VPVNGTVDGT HPVRGLNDPV PSTSSKEPSP  300
LIDQTTEIKQ QDSCDSDETT EINVKEEHVD GPEYKRRQKR SSTIEFGSLP KTGKKPKFVV  360
HAAGDMGISG DGYRWRKYGQ KMVKGNPHPR NYYRCTSAGC PVRKHIERAV DNTSAVVITY  420
KGVHDHDMPV PRKRPSCKSS SVVAATPVSA ENLQINKTEP DPSQTQWSVD KEGELTGEAL  480
NVGAEKKSES ARTLLSIGFE IKPC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G30935.1	1e-100	WRKY family protein