PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN00938.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | Dof | ||||||||
Protein Properties | Length: 281aa MW: 31218.3 Da PI: 8.3763 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 126.6 | 7.5e-40 | 36 | 97 | 2 | 63 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63 ke+al+cprC+stntkfCyynnyslsqPryfCk+CrryWt+GG+lrnvPvGgg+rknk+sss PIN00938.1 36 KEQALNCPRCNSTNTKFCYYNNYSLSQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKRSSS 97 7899******************************************************9875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 281 aa Download sequence |
MDTAQWPQGI QILKPAVEDP RPAGGTTIEK KPRPQKEQAL NCPRCNSTNT KFCYYNNYSL 60 SQPRYFCKTC RRYWTEGGSL RNVPVGGGSR KNKRSSSTTT ASISTTNINS ISSKKLISSQ 120 SFSPQNPKIQ QGHDLNLAYN PSCYNGTVSE FHVSLPFGTT NSSSSNSSHI PILGNLSSFM 180 SSETNSVPYN SSSLNFIDFK PNLGFSLDGL ENGYGNIQGV EDHHHHHHHH HNTNTSRSFL 240 FPFEELNKPV STNDQFEAHE DHRVQGEANG YWNGMLAGGS W |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G24060.1 | 2e-42 | Dof family protein |