PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN00839.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | YABBY | ||||||||
Protein Properties | Length: 213aa MW: 23702.1 Da PI: 7.8646 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 240.8 | 2.9e-74 | 15 | 177 | 3 | 170 |
YABBY 3 vfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkee..lleelkveeenlksnvekeesastsvsse 99 + +seq+Cyv+CnfC+t+lavsvP tslfk+vtvrCGhCt+llsvn++ + +a + hl++s+ + ll+e +++ +nl n+ + ++ t + PIN00839.1 15 LSPNSEQLCYVHCNFCDTVLAVSVPCTSLFKTVTVRCGHCTNLLSVNMRGMLLPTANQLHLGHSFFSPqnLLDEIRNSPSNLLINQPNPNE--TLM--- 108 66789**********************************************9999999*****9986634777777777777666554443..333... PP YABBY 100 klsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170 + +e+p++p ++rPPekrqrvPsaynrfik+eiqrika+nPdishreafsaaaknWahfP+ihfgl PIN00839.1 109 --PVRGIDELPKPPVANRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGL 177 ..45667899**999******************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 213 aa Download sequence |
MSSSSAFAPD HHHHLSPNSE QLCYVHCNFC DTVLAVSVPC TSLFKTVTVR CGHCTNLLSV 60 NMRGMLLPTA NQLHLGHSFF SPQNLLDEIR NSPSNLLINQ PNPNETLMPV RGIDELPKPP 120 VANRPPEKRQ RVPSAYNRFI KDEIQRIKAG NPDISHREAF SAAAKNWAHF PHIHFGLMPD 180 QPVKKPNVCQ QEGEDVLMKD GFLAPANVGV SPY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45190.1 | 3e-94 | YABBY family protein |