PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN00814.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family ERF
Protein Properties Length: 218aa    MW: 24583.4 Da    PI: 6.5479
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN00814.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP251.82e-16119169255
         AP2   2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                 +y+GVr+++ +g+++AeIrdp     k  r++lg+++ + +Aa+a++ a+ k++g
  PIN00814.1 119 RYRGVRRRP-WGKYAAEIRDP---ArKGSRIWLGTYDAEVDAARAYDCAAFKMRG 169
                 8********.**********8...4445**********99*************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 218 aa     Download sequence    
MTTSDDSLTL EFIRHHLFEE PFFDNLTALL SFSDMPIWSP EETESPSSGS DFYPRTDSPI  60
SRCYSFSPDI FEFETKPKIT VNCSSDAPNK PVVKPEPESV ELDNGSGRET QPGGSMGKRY  120
RGVRRRPWGK YAAEIRDPAR KGSRIWLGTY DAEVDAARAY DCAAFKMRGR KAILNFPSDA  180
GKYAPPANAG RKRRREGRSD ELLDMNSKQI LQEITDRG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1191195RKRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G07580.18e-45ERF family protein