PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN00813.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family ERF
Protein Properties Length: 274aa    MW: 30422.8 Da    PI: 7.5978
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN00813.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.59.1e-20118168255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 +y+GVr+++ +g+++AeIrdp+     +r++lg+f+ta eAaka+++a+ kl+g
  PIN00813.1 118 HYRGVRQRP-WGKFAAEIRDPTRK--GTRVWLGTFDTAVEAAKAYDRAAFKLRG 168
                 7********.**********8542..4*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 274 aa     Download sequence    
MAASHQSSAL ETIRQHLLGD SSFMENYCPS SVFSSDQYQV SRTSSNSSSC TSSLNLDFLT  60
SFSPKRGCEY LEFGANNSQV KHSVSNNSDK QSHFSERKPL LNIEIPQKVR DGSVERRHYR  120
GVRQRPWGKF AAEIRDPTRK GTRVWLGTFD TAVEAAKAYD RAAFKLRGSK AILNFPLEIG  180
NSKASPENDE VPVNGGRKRE RDGEGEEREK KEIKREEIDG VGNEGEFTAA VAPLTPSSWT  240
TTVWDSDVKG IFEVPLLSPL PSHPSSGYST LMVI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51190.14e-40ERF family protein