PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN00615.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

GRF

Protein Properties

Length: 352aa MW: 38629.9 Da PI: 8.1347

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN00615.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	78.7	5.5e-25	128	171	1	44
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d+epgrCrRtDGKkWRCsr+v g+k+CErH+hrgr+rsrk++e PIN00615.1 128 DPEPGRCRRTDGKKWRCSRDVGVGQKYCERHMHRGRNRSRKPVE 171 79***************************************987 PP
2	QLQ	45.6	2.1e-16	60	95	1	36
QLQ 1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiq 36 s+F+ +Q+q+L+ Q+l++++++a++ vPpeLl ++ PIN00615.1 60 SYFSLSQWQELELQALIFRHMIAGASVPPELLHLVK 95 78*****************************98776 PP

Sequence ? help Back to Top
Protein Sequence Length: 352 aa Download sequence
MDFNLKQWSN IESEQITPLP RNTIDESPSS APLPLFVPHS TTNQSAYPSD HSTKFPKMGS 60 YFSLSQWQEL ELQALIFRHM IAGASVPPEL LHLVKKSLIN SPSSPFYLSQ YYQPALLQSG 120 YWGRAAMDPE PGRCRRTDGK KWRCSRDVGV GQKYCERHMH RGRNRSRKPV EIPTSTPYGG 180 GAGGTTLKTN HSIISGGGGG SPHFTLSGTS HSTNLFHLDE RPSDSIIETK GPYEAENESQ 240 SNGRTLRFFD DWPKSLHDTE NSSTNLSISM PGSDFSLKLG TGNGDENNTH IVSNQRDKPQ 300 LNWGMNWETN PVAPMGGPLA EALRSSGSGL SPTSVLHRLG RAPGSEGSYV SS

Sequence ? help Back to Top

Protein Sequence Length: 352 aa Download sequence

MDFNLKQWSN IESEQITPLP RNTIDESPSS APLPLFVPHS TTNQSAYPSD HSTKFPKMGS  60
YFSLSQWQEL ELQALIFRHM IAGASVPPEL LHLVKKSLIN SPSSPFYLSQ YYQPALLQSG  120
YWGRAAMDPE PGRCRRTDGK KWRCSRDVGV GQKYCERHMH RGRNRSRKPV EIPTSTPYGG  180
GAGGTTLKTN HSIISGGGGG SPHFTLSGTS HSTNLFHLDE RPSDSIIETK GPYEAENESQ  240
SNGRTLRFFD DWPKSLHDTE NSSTNLSISM PGSDFSLKLG TGNGDENNTH IVSNQRDKPQ  300
LNWGMNWETN PVAPMGGPLA EALRSSGSGL SPTSVLHRLG RAPGSEGSYV SS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52910.1	3e-70	GRF family protein