PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN00569.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family ERF
Protein Properties Length: 331aa    MW: 37526.4 Da    PI: 4.5817
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN00569.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.31e-19108157255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                 +y+GVr+++ +g+W+AeIrdp+    r +r++lg+f+taeeAa  +++a+ +++g
  PIN00569.1 108 RYRGVRQRR-WGKWAAEIRDPT----RrTRIWLGTFDTAEEAAMVYDRAAIQIRG 157
                 8*****998.**********84....34***********************9998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 331 aa     Download sequence    
MDSEISKPIK FSVHKTVTTK LIAPPPKGSC SGAGTPRTVT FTVTDYDATD SSSDEGEYEG  60
VKVKFRRVKK HVNEIRMERG SVSEMKCEKQ SDTAKRKRLA VEEGGVKRYR GVRQRRWGKW  120
AAEIRDPTRR TRIWLGTFDT AEEAAMVYDR AAIQIRGPNA QTNFIKPPEK VEPVVEAAVT  180
EYDSGKESCE NQSSPTSVLR FRTNNNDGVE LEHKNTDDTN NLRTSDDPNM IDFHSKNIDD  240
NTEDVRTLAR ENSGSLVGPV QGEQNEEDLL MNNYLPFDEC FLDNYFDFSS SSQLIFDENR  300
IGDGLLDKNL DGILDGDFES LTWDFNEFFD D
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.12e-40ERF family protein