PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN00173.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family bHLH
Protein Properties Length: 272aa    MW: 31167.3 Da    PI: 6.4075
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN00173.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH51.42e-1686139155
                 CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                 ++ +hn++Er RR+riNs ++ Lr+llP      ps+Kls  +++ ++v+YI +Lq
  PIN00173.1  86 KKINHNANERDRRKRINSLYSALRSLLPAhE--DPSRKLSIPATVSRVVKYIPELQ 139
                 6789*************************55..9*******************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 272 aa     Download sequence    
MVSISPQISP LELLENPFTS HHEQENSSNF LINKENILTQ TSGSIDEYQY LRDDSPSYDM  60
MIQGQNMEFQ SFNYQGEDRE GYKMMKKINH NANERDRRKR INSLYSALRS LLPAHEDPSR  120
KLSIPATVSR VVKYIPELQN EVEGLLQKKE NLILKINSSF REDGEDLSMN FRAQGQNRKG  180
VQTSLSAISA TQISDQEIVV HILMPQVEKG SFCGVITHLE MEGFLVISTS WFESFGGWVF  240
CNLHLQAQGS QVKDAEMLKK KILSFIEKGR RN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56970.17e-38bHLH family protein