PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN00112.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family C2H2
Protein Properties Length: 283aa    MW: 31260.7 Da    PI: 7.6576
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN00112.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2140.0001594116123
                 EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                 ++C+ C + Fs++  L  H++ H
  PIN00112.1  94 FTCNFCRREFSTSQALGGHQNAH 116
                 89******************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 283 aa     Download sequence    
METLEPCHSE ASNISATSEE SPTKDHEKRE KEKEVSTSKR EPKSRLMLDL KLSNDELMSQ  60
RNPNSKLELN LFNSSIASES SNEGTRKPSE SKTFTCNFCR REFSTSQALG GHQNAHKQER  120
ALAKHRHGMV DMAVAGAPPS FGHLGYPYYP YSTFSQIPFY GTTFNKSLGV RSESMIHKPY  180
PYNLPWSSSS PSSYRFGLGK MSSRAYLLNP PSSTSYDGLR MENIQSPQIN GSGFGATLSL  240
GVDPNPNPNS IAIDNEGNKN QGLRVGNIEE QVDASGLDLN LKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G10970.14e-22C2H2 family protein