PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN00058.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family bHLH
Protein Properties Length: 331aa    MW: 37458.1 Da    PI: 4.5711
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN00058.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.91.3e-11177220654
                 HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
         HLH   6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                  ++ErrRR+r+N++++ Lr+++Pk +      K++  +iL  +++Y+k+L
  PIN00058.1 177 LMAERRRRKRLNDRLSMLRSVVPKiS------KMDRTSILGDTIDYMKEL 220
                 589*********************66......****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 331 aa     Download sequence    
MDYYTSEHSF LEELLGLREM DSYYNTNQDF NNINGGWTLD DSFTNNHNFA HIPITTNIAS  60
FEDFDYSLLL NQASSSYAPF GDELSPPDFN VDSSATNLDS QTFPYCTQEH YYSMSILDDE  120
DCASALFGNG APNLDVGAPC KVEPLPEMPA FNMGFCPQTE GRKNKVKKLN GQPSKNLMAE  180
RRRRKRLNDR LSMLRSVVPK ISKMDRTSIL GDTIDYMKEL LERINALQEE MDLGSSQLSS  240
MSIFKDVKPS ELLVRNSPKF DVERRNSDTR IEICCSSKPG LLLSTVTTLE ALGLEIQQCV  300
ISSFNDFGLQ ASCSEVRFYS RDKYLNTKIL V
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1180187ERRRRKRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65640.16e-70bHLH family protein