PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN00045.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

GRF

Protein Properties

Length: 312aa MW: 34216.1 Da PI: 8.5691

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN00045.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	82.4	3.8e-26	79	122	1	44
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d+epgrCrRtDGKkWRCsr+v+ g+k+CErH+hrgr+rsrk++e PIN00045.1 79 DPEPGRCRRTDGKKWRCSRDVVVGQKYCERHMHRGRNRSRKPVE 122 79***************************************987 PP
2	QLQ	48.9	2e-17	3	38	1	36
QLQ 1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiq 36 s+F+ aQ+q+L+ Q+l+y+y+++++ vP+eLl++++ PIN00045.1 3 SYFSLAQWQELELQALIYRYMISGAAVPHELLLHVK 38 79*******************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 312 aa Download sequence
MGSYFSLAQW QELELQALIY RYMISGAAVP HELLLHVKRS LISSSPSSPY YICNPLHQYY 60 PQYQPSLLQS GYWGRAAVDP EPGRCRRTDG KKWRCSRDVV VGQKYCERHM HRGRNRSRKP 120 VEIPTSTTGA AAAYGGSGGG GVVKTNLSTA QGMANNDVSG GLSGHLSSSM DLLPVNRRPL 180 DSIDETKYPY GAQNDGPTNS DRTLRHFFND WPKSLQETDD ATNLSISMPE NPSSDFLKLG 240 TGNGDEFRAQ IASDERERIQ PIWGTTWDAA RVAPVGGPLA EALRSSTTTT SPTSVLHRLT 300 RSSASEASFV SS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52910.1	8e-46	GRF family protein