PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN00015.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

ARF

Protein Properties

Length: 682aa MW: 74904.8 Da PI: 7.1136

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN00015.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	77.2	1.7e-24	120	221	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 f k+lt+sd+++ g +++p+ +ae++ ++ + t+ +d +g++W++++iyr++++r++lt+GW+ Fv+ ++L +gD++vF+ + +++ l PIN00015.1 120 FAKTLTQSDANNGGGFSVPRYCAETIfprldysADPPVQ--TILAKDVHGETWKFRHIYRGTPRRHLLTTGWSTFVNHKKLVAGDSIVFM--RAENGDL 214 89**************************996555555..89*******************************************..4488999 PP EEEEE-S CS B3 93 vvkvfrk 99 +v+++r+ PIN00015.1 215 CVGIRRA 221 **997 PP
2	Auxin_resp	116	3.4e-38	282	365	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdldpvrWpnSkWrsLk 83 aa+ a+++++F+vvY+Prast+eF+vk++ v++a++++++ GmRfkmafetedss++++ +Gt+++v+ +dp+rWp+S+Wr+L+ PIN00015.1 282 AATLAANGQPFDVVYYPRASTPEFCVKASLVKAAVQIRWCSGMRFKMAFETEDSSRISWfMGTISSVQVADPIRWPDSPWRLLQ 365 68899*****************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 682 aa Download sequence
MITFMESKEK MKETEKCLDS QLWHACAGSM VQMPSVNSKV FYFPQGHSEH ASGNVDFRHC 60 PRIPPYIPCR VSAVKFMADP ETDEVFAKIR LVPITNEVGF DDDGAVGISG SENQEKPTSF 120 AKTLTQSDAN NGGGFSVPRY CAETIFPRLD YSADPPVQTI LAKDVHGETW KFRHIYRGTP 180 RRHLLTTGWS TFVNHKKLVA GDSIVFMRAE NGDLCVGIRR AKRGIGGGPE MPSGWNPACG 240 NSVVPYGGFS AFLRDDESKL NRNTNGSWIG RGKVKAEAVI EAATLAANGQ PFDVVYYPRA 300 STPEFCVKAS LVKAAVQIRW CSGMRFKMAF ETEDSSRISW FMGTISSVQV ADPIRWPDSP 360 WRLLQVTWDE PDLLQNVKRV SPWLVELVSN MPAIHLSPFS PPRKKLRLPQ HPEFPLDSQI 420 PLPPFSSNHL LGSSNPFGCL PNNTPAGMQG ARHAQYGLSL SDYKLQSGFF PVGFLPLDRV 480 PVPSGTPSPI IPKPGSNDNV SCLLTMGNST QESKKPDNRK AAPFVLFGRP ILTEKQISLS 540 CSSDTVSPAR TGNSSSDGNA DNKGNTSDGS GSALNENEAP ERSSCEGFQS ELSLETGHCK 600 VFMESDNVGR TLDLTLLGSY EELYEKLANM FGIEVSEILN RVLYRDATGV VRQLGDEPFR 660 NFMKTARRLT ILADSSSDNV GV

Sequence ? help Back to Top

Protein Sequence Length: 682 aa Download sequence

MITFMESKEK MKETEKCLDS QLWHACAGSM VQMPSVNSKV FYFPQGHSEH ASGNVDFRHC  60
PRIPPYIPCR VSAVKFMADP ETDEVFAKIR LVPITNEVGF DDDGAVGISG SENQEKPTSF  120
AKTLTQSDAN NGGGFSVPRY CAETIFPRLD YSADPPVQTI LAKDVHGETW KFRHIYRGTP  180
RRHLLTTGWS TFVNHKKLVA GDSIVFMRAE NGDLCVGIRR AKRGIGGGPE MPSGWNPACG  240
NSVVPYGGFS AFLRDDESKL NRNTNGSWIG RGKVKAEAVI EAATLAANGQ PFDVVYYPRA  300
STPEFCVKAS LVKAAVQIRW CSGMRFKMAF ETEDSSRISW FMGTISSVQV ADPIRWPDSP  360
WRLLQVTWDE PDLLQNVKRV SPWLVELVSN MPAIHLSPFS PPRKKLRLPQ HPEFPLDSQI  420
PLPPFSSNHL LGSSNPFGCL PNNTPAGMQG ARHAQYGLSL SDYKLQSGFF PVGFLPLDRV  480
PVPSGTPSPI IPKPGSNDNV SCLLTMGNST QESKKPDNRK AAPFVLFGRP ILTEKQISLS  540
CSSDTVSPAR TGNSSSDGNA DNKGNTSDGS GSALNENEAP ERSSCEGFQS ELSLETGHCK  600
VFMESDNVGR TLDLTLLGSY EELYEKLANM FGIEVSEILN RVLYRDATGV VRQLGDEPFR  660
NFMKTARRLT ILADSSSDNV GV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G30080.1	0.0	ARF family protein