PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIM99979.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | MYB_related | ||||||||
Protein Properties | Length: 187aa MW: 21839.9 Da PI: 7.4954 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 57 | 4.4e-18 | 13 | 62 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 +g+WT+eEd+ll+++v+q+G g+W+ +++ gRt++++k++w+++ PIM99979.1 13 KGPWTPEEDKLLIEYVRQHGEGRWSCVSKSAArylPGRTDNEIKNYWRTH 62 79********************99988776666666************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 187 aa Download sequence |
MESWGVSEQG WRKGPWTPEE DKLLIEYVRQ HGEGRWSCVS KSAARYLPGR TDNEIKNYWR 60 THFKKRKTSD NQDKRKSHRQ TEQQKQEYDP KSTKASSDQA AEAMSDEEKG KKPTEMADQN 120 LENNQFLPMN YQQNCTNWSD YYNIIPVDNY LWGGLWNLDD QNGCSKMANQ NYPANVGNHS 180 RGGGYIF |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 74 | 78 | KRKSH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G30210.1 | 7e-29 | MYB family protein |