PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIM99937.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

TCP

Protein Properties

Length: 352aa MW: 38458.4 Da PI: 6.5477

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIM99937.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	117.2	2.1e-36	30	139	2	106
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec...eaesssssasnsssg.....kaak 92 +g+kdrhsk++T++g+RdRRvRl a++a++f+d+qd+LG+d++sk+++WL+++ak+ai+el+++++ +++ e+e+ +++++++ + + ++ PIM99937.1 30 TGRKDRHSKVCTAKGPRDRRVRLAAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKAAIDELAELPAWNPTTNvnfEKENGENNVEEDAYKadlvgS-SN 127 79**************************************************************44444111223333333333333333444421.22 PP TCP 93 saakskksqksaas 106 + +++++++s PIM99937.1 128 VS--AINEEQQNSS 139 22..2222222222 PP

Sequence ? help Back to Top
Protein Sequence Length: 352 aa Download sequence
MGHRNPSRLG LKTTSGEIVE VQGGHIVRST GRKDRHSKVC TAKGPRDRRV RLAAHTAIQF 60 YDVQDRLGYD RPSKAVDWLI KKAKAAIDEL AELPAWNPTT NVNFEKENGE NNVEEDAYKA 120 DLVGSSNVSA INEEQQNSSF LPPSMDSDAI ADTIKSFFPM GASDGASSSS MQFQSFPNRS 180 HCQDLKLSLQ SFQDPVMLHH HNEQEHPPAH IQGQFLLSGF DAITAWPEHH QFHGGSTPVS 240 AGYLFNSPPA QQLLGHNQFF SQRGPLQSST TPSVRAWVDP PVVAISAADH GHPPQPPPHH 300 YPGVLPVYPS SVIASGFGGF TGFHIPARIQ GDDEEHDGYS DKPSSASSDS RH

Sequence ? help Back to Top

Protein Sequence Length: 352 aa Download sequence

MGHRNPSRLG LKTTSGEIVE VQGGHIVRST GRKDRHSKVC TAKGPRDRRV RLAAHTAIQF  60
YDVQDRLGYD RPSKAVDWLI KKAKAAIDEL AELPAWNPTT NVNFEKENGE NNVEEDAYKA  120
DLVGSSNVSA INEEQQNSSF LPPSMDSDAI ADTIKSFFPM GASDGASSSS MQFQSFPNRS  180
HCQDLKLSLQ SFQDPVMLHH HNEQEHPPAH IQGQFLLSGF DAITAWPEHH QFHGGSTPVS  240
AGYLFNSPPA QQLLGHNQFF SQRGPLQSST TPSVRAWVDP PVVAISAADH GHPPQPPPHH  300
YPGVLPVYPS SVIASGFGGF TGFHIPARIQ GDDEEHDGYS DKPSSASSDS RH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G53230.1	5e-76	TCP family protein