PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIM99857.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

C2H2

Protein Properties

Length: 435aa MW: 48800.2 Da PI: 8.6574

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIM99857.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.5	1.1e-05	82	102	3	23
ETTTTEEESSHHHHHHHHHHT CS zf-C2H2 3 CpdCgksFsrksnLkrHirtH 23 C+ CgksF ++ L H+++H PIM99857.1 82 CKECGKSFQSWKALFGHMKSH 102 99******************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 435 aa Download sequence
MEEDQEVKHM CKFCYKVFPC GRSLGGHMRS HLINISSSDH PKKKLPPLTN VKSNVLVNSR 60 KKTRKLSKTS EEDTLLQDKL CCKECGKSFQ SWKALFGHMK SHSVNGRALE EDSWNSSSDH 120 HNLIMDSQSD NEGTTPLCRR KRSDRTKRYV ATTSSSSLTN FEFDHQEEEE EVALSLILLS 180 KDTGMTSIVE SSSTSSELLE AKKADKMLKS SDGECLKSLK SDEGLKTGNL RVSSDELRAE 240 KSEVNSPKDL INKSGLNQFR SDRKKIKSSK RKLIDSHDSE LSASLDYKRA YGPSDSDQKS 300 KFICIICGKN FPSYQALGGH RASHKKFKGC CAPTSENLQN KSENGNQIGR VFVEKIDKGV 360 ECKKNKDHEC PICFKGFLSG QALGGHKRSH LISDPSISTK KQIPEIRNFL DLNLPAPVEE 420 ECDESKPWWI NICPS

Sequence ? help Back to Top

Protein Sequence Length: 435 aa Download sequence

MEEDQEVKHM CKFCYKVFPC GRSLGGHMRS HLINISSSDH PKKKLPPLTN VKSNVLVNSR  60
KKTRKLSKTS EEDTLLQDKL CCKECGKSFQ SWKALFGHMK SHSVNGRALE EDSWNSSSDH  120
HNLIMDSQSD NEGTTPLCRR KRSDRTKRYV ATTSSSSLTN FEFDHQEEEE EVALSLILLS  180
KDTGMTSIVE SSSTSSELLE AKKADKMLKS SDGECLKSLK SDEGLKTGNL RVSSDELRAE  240
KSEVNSPKDL INKSGLNQFR SDRKKIKSSK RKLIDSHDSE LSASLDYKRA YGPSDSDQKS  300
KFICIICGKN FPSYQALGGH RASHKKFKGC CAPTSENLQN KSENGNQIGR VFVEKIDKGV  360
ECKKNKDHEC PICFKGFLSG QALGGHKRSH LISDPSISTK KQIPEIRNFL DLNLPAPVEE  420
ECDESKPWWI NICPS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45120.1	1e-25	C2H2 family protein